Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02108 ATGGCTTCTTTTGGGCCAAATGGAACTGAGAATGAGGATTCCTTGCCTCCCCCACCTCCCGTTGTCCCTTCAGATGTTGTACCTTTCAAAGCTGAGCCGGAGAAGAAAAAGGCTTCAAGGCTTCCAATAGCCAGGCGTGGGCTTGCTTCAAAAGGGCTAAAAATGCAACTTCTCACCAATCACTACAGAGTGAACGTTGCAAACACTGACGGGCATTTTTATCAGTATAGTGTTGCTCTTTCTTATGAAGATGGACGACCTGTGGAGGGTAAGGGTGTAGGGAGGAAGCTTCTGGACAGGGTGCATGAAACGTATGATTCTGAATTGAATGGGAAGGATTTTGCATATGATGGTGAGAAGACTCTGTTTACTCTTGGGTCTCTTGCTCGCAACAAGCTTGAGTTTACTGTTGTTCTGGAGGATGTTATTGCTAGCAGAAATAATGGAAACTGCAGTCCAGATGGAAACGGAGAACTAAATGAGAGTGACAAAAAGAGGATGAGGCGCCCTAATAGATCCAAGACATTTAAAGTTGAGCTTAGCTTTGCTTCAAAGATTCCATTGCAGGCCATTGCCAATGCTCTACGTGGACAGGAATCTGAGAATTATCAAGAAGCAATAAGGGTGCTTGATATCATTTTGAGGCAACATGCTGCTAAGCAAGGCTGTTTGCTTGTGCGGCAATCGTTTTTCCACAATGATCCCAAGAATTTTGCTGATGTTGGAGGAGGTGTCCTTGGATGCAGGGGTTTCCACTCTAGCTTTAGAACTACTCAGAGTGGACTGTCTTTGAACATAGATGTCTCGACCACCATGATAATTACCCCTGGGCCTGTGGTGGACTTCCTAATATCCAATCAAAATGTGAGAGACCCCTTTTCACTTGACTGGACAAAGGCCAAGAGAACATTAAAAAACCTGAGAATTAAAACGAGCCCATCTAATCAAGAATTCAAAATCACTGGGCTTAGTGAACAACCTTGCAAAGATCAAACGTTTACATTGAAGAAAAAAGGTGGAATCAATGGTGATGATACCGAGGAAGAAGTGACAGTATATGATTATTTTGTTAATATCCGCAAGATAGATCTTCGGTATTCTGGGGACCTCCCATGTATCAACGTTGGAAAGCCAAAAAGGCCAACTTACATTCCTCTTGAGCTTTGCTCCTTGGTATCCCTTCAACGTTATACAAAAGCACTATCCACACTTCAAAGGGCTTCATTGGTGGAGAAGTCCAGGCAGAAGCCACAGGAGAGGATGAGGGTCCTGTCTGATGCACTAAAAAGTAGCAATTATGGTTCTGAACCCATGCTACGCAATTGTGGGATTTCTATAAGCCCCAGCTTTACTGAAGTTGAGGGTCGGGTTTTGCAAGCTCCAAGGTTGAAATTTGGTAATGGGGAGGACTTCAATCCTAGAAATGGGAGGTGGAACTTCAATAACAAGAAAATTGTCAAGCCTACTAAAATTGAAAGATGGGCTGTGGTTAACTTCTCTGCACGCTGTGATATACGAGGGCTTGTGAGGGATCTCATTAAGTGCGGTCAAATGAAAGGAATTGTGATAGACCAGCCGTTTGATGTGTTTGAAGAAAATGGTCAGTTTAGGCGTGCACCGCCAGTGGTTAGAGTGGAAAAGATGTTTGAGTTGGTTCAGTCTAAACTTCCTGGGGCTCCTCAGTTTCTTCTTTGTCTGCTTCCTGAAAGGAAAAATTCTGATCTTTATGGTCCATGGAAGAAGAAGAATCTTGCGGAGTTTGGAATTGTGACTCAGTGTATAGCTCCAACAAGGGTTAATGACCAATACTTGACTAATGTTCTTTTGAAGATAAATGCTAAGCTTGGTGGCCTGAACTCACTGCTAGGCATTGAGCATTCTCCTTCTATTCCTATTGTTTCTAGATCTCCAACCATCATTATTGGAATGGACGTGTCCCATGGTTCGCCAGGGCAAACTGATATTCCTTCAATAGCAGCGGTGGTCAGCTCTAGAGAGTGGCCTCTAATATCAAAGTATAGGGCAAGTGTCCGTACCCAGTCTCCGAAGATGGAAATGATTGATAATTTGTTCAAGAAAGTTTCTGACAAGGAGGATGAAGGCATAATGAGGGAACTTCTACTTGATTTTTATACAAGTTCTGGGAATAGAAAGCCCGATAATATAATCATATTCAGGGACGGTGTTAGTGAGTCCCAGTTCAATCAAGTTTTGAACATTGAACTTGATCAAATTATCGAGGCTTGCAAGTTTTTAGATGAAAAATGGAATCCCAAATTTTTGGTGATTGTTGCTCAAAAGAACCATCATACTAAATTCTTTCAACCTGGATCTCCTGACAATGTTCCTCCTGGGACTGTAATTGATAACAAAATTTGCCATCCTCGGAATTATGATTTTTACATGTGTGCACATGCTGGAATGATTGGTACTAGCAGGCCTACACACTATCATGTTCTCTTGGATGAGATTGGGTTTTCACCTGATGATCTGCAGGAGCTGGTGCATTCTTTATCATATGTGTATCAGAGGAGCACCACTGCCATTTCTGTTGTTGCTCCAATATGTTATGCTCACCTGGCTGCAACTCAGATGGGTCAGTTTATGAAATTTGAGGACAAATCTGAGACATCCTCAAGTCATGGTGGTATGCCTGCTCCTCCTGTCCCTCAGTTGCCAAGATTGCAGGATAATGTGTCAAGCTCAATGTTCTTTTGTTGA 2721 0.427 MASFGPNGTENEDSLPPPPPVVPSDVVPFKAEPEKKKASRLPIARRGLASKGLKMQLLTNHYRVNVANTDGHFYQYSVALSYEDGRPVEGKGVGRKLLDRVHETYDSELNGKDFAYDGEKTLFTLGSLARNKLEFTVVLEDVIASRNNGNCSPDGNGELNESDKKRMRRPNRSKTFKVELSFASKIPLQAIANALRGQESENYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIITPGPVVDFLISNQNVRDPFSLDWTKAKRTLKNLRIKTSPSNQEFKITGLSEQPCKDQTFTLKKKGGINGDDTEEEVTVYDYFVNIRKIDLRYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALSTLQRASLVEKSRQKPQERMRVLSDALKSSNYGSEPMLRNCGISISPSFTEVEGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIVKPTKIERWAVVNFSARCDIRGLVRDLIKCGQMKGIVIDQPFDVFEENGQFRRAPPVVRVEKMFELVQSKLPGAPQFLLCLLPERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSLLGIEHSPSIPIVSRSPTIIIGMDVSHGSPGQTDIPSIAAVVSSREWPLISKYRASVRTQSPKMEMIDNLFKKVSDKEDEGIMRELLLDFYTSSGNRKPDNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDKSETSSSHGGMPAPPVPQLPRLQDNVSSSMFFC 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02108 906 Gene3D - 457 622 - -
Pumo9g02108 906 Gene3D - 629 906 IPR036397 GO:0003676
Pumo9g02108 906 CDD PAZ_argonaute_like 276 392 - -
Pumo9g02108 906 SMART Piwi_a_2 562 870 IPR003165 GO:0003676
Pumo9g02108 906 Gene3D paz domain 270 397 - -
Pumo9g02108 906 MobiDBLite consensus disorder prediction 149 172 - -
Pumo9g02108 906 Pfam Argonaute linker 2 domain 419 465 IPR032472 -
Pumo9g02108 906 Pfam PAZ domain 280 409 IPR003100 GO:0005515
Pumo9g02108 906 SUPERFAMILY PAZ domain 271 433 IPR036085 GO:0005515
Pumo9g02108 906 MobiDBLite consensus disorder prediction 873 892 - -
Pumo9g02108 906 Pfam N-terminal domain of argonaute 54 214 IPR032474 -
Pumo9g02108 906 SMART DUF1785_2 224 276 IPR014811 -
Pumo9g02108 906 Pfam Argonaute linker 1 domain 226 274 IPR014811 -
Pumo9g02108 906 CDD Piwi_ago-like 437 864 IPR045246 -
Pumo9g02108 906 MobiDBLite consensus disorder prediction 1 38 - -
Pumo9g02108 906 FunFam Protein argonaute 7 271 397 - -
Pumo9g02108 906 ProSiteProfiles Piwi domain profile. 562 870 IPR003165 GO:0003676
Pumo9g02108 906 ProSiteProfiles PAZ domain profile. 301 393 IPR003100 GO:0005515
Pumo9g02108 906 MobiDBLite consensus disorder prediction 12 26 - -
Pumo9g02108 906 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 49 872 - -
Pumo9g02108 906 FunFam Protein argonaute 3 630 906 - -
Pumo9g02108 906 Pfam Piwi domain 563 870 IPR003165 GO:0003676
Pumo9g02108 906 SUPERFAMILY Ribonuclease H-like 546 868 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02108 Pumo-Chr9 52276915 52287006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02108 45 906 Eukaryotic Initiation Factors Gene Family AT5G43810 34.721 1.69e-160 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02108 K11593 - gmx:100779439 1759.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02108 9 52276915 52287006 Pumo9g02108 9 52276915 52287006 ECH