Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02094 ATGAGTCAGCCTAAGATTAAGCGCCGAGTTGGTAAATATGAGGTGGGGAGGACCATTGGTGAGGGTACATTTGCAAAGGTGAAATTTGCAAGGAACTCTGAGACAGGAGAGCCTGTGGCTCTTAAAATTCTTGACAAGGAGAAGGTGCTAAAGCACAAGATGGCTGAGCAGATCAGGAGAGAAGTAGCTACAATGAAACTAATCAAGCATCCAAATGTTGTTCGATTGTATGAGGTCATGGGAAGCAAGACAAAAATATATATTGTTTTGGAGTTTGTAACTGGGGGGGAGCTCTTTGACAAAATTGTAAACCATGGAAGGATGAGTGAACATGAAGCACGTAGATATTTCCAGCAGCTTATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTGAAGCCAGAAAATTTGCTATTAGATGCTTATGGGCACCTTAAAGTTTCTGATTTTGGTTTGAGTGCCCTCTCCCAGCAAGTTAGGGATGATGGACTTCTTCATACTACATGTGGCACACCAAATTATGTTGCTCCTGAGGTCCTTAACGATAGAGGCTATGATGGGGCAACTGCAGACTTGTGGTCATGTGGGGTGATTCTCTTTGTATTAGTTGCAGGTTACTTGCCTTTTGACGACCCTAATCTTATGAACCTGTATAAAAAGATCTCAGCTGCTGAATTTACTTGCCCCCCATGGCTTTCTTTCAGTGCCAGGAAACTGATTACACGAATCTTGGATCCCGATCCCACCACTCGTATCACTATACCTGAGATTTTGGATGATGAATGGTTTAAGAAAGATTATAAGCCTCCAGTTTTTGAGGAGAACGGGGAAACCAACCTCGATGATGTTGAAGCTGTCTTTAAAGATTCTGAAGAGCACCATGTGACAGAGAAGAAAGAAGAGCAGCCTACAGCCATGAATGCATTTGAGTTAATTTCCATGTCCAAAGGGCTGAACCTTGAAAACTTGTTTGATACAGAGCAGGGATTTAAAAGGGAAACAAGATTCACCTCAAAATCCCCTGCGGATGAGATAATCAACAAGATTGAGGAAGCTGCAAAACCTCTTGGCTTTGATGTGCAGAAGAAAAATTACAAGATGAGGCTTGCAAATGTGAAAGCTGGAAGGAAGGGAAACCTTAATGTTGCCACAGAGATATTTCAAGTGGCACCTTCTCTTCACATGGTTGAGGTACGGAAGGCAAAAGGAGATACATTGGAGTTCCATAAGGTGTCCTTCTGTCCCCTTCTTTGTTTAATTGCTTTAGTGCTTGCCACTTCAAAAATAACTGTTCTATTGTCAATTTTACCAATAAGAGCATCAGCGCTTTTCATTTTGTCAATATCAACTTTTTTTTTATAA 1377 0.4154 MSQPKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIRREVATMKLIKHPNVVRLYEVMGSKTKIYIVLEFVTGGELFDKIVNHGRMSEHEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAYGHLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDRGYDGATADLWSCGVILFVLVAGYLPFDDPNLMNLYKKISAAEFTCPPWLSFSARKLITRILDPDPTTRITIPEILDDEWFKKDYKPPVFEENGETNLDDVEAVFKDSEEHHVTEKKEEQPTAMNAFELISMSKGLNLENLFDTEQGFKRETRFTSKSPADEIINKIEEAAKPLGFDVQKKNYKMRLANVKAGRKGNLNVATEIFQVAPSLHMVEVRKAKGDTLEFHKVSFCPLLCLIALVLATSKITVLLSILPIRASALFILSISTFFL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02094 458 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Pumo9g02094 458 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02094 458 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Pumo9g02094 458 FunFam Non-specific serine/threonine protein kinase 305 424 - -
Pumo9g02094 458 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02094 458 Pfam NAF domain 308 367 IPR004041 GO:0007165
Pumo9g02094 458 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Pumo9g02094 458 CDD STKc_SnRK3 12 267 - -
Pumo9g02094 458 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Pumo9g02094 458 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 415 - -
Pumo9g02094 458 Gene3D Transferase(Phosphotransferase) domain 1 93 275 - -
Pumo9g02094 458 SUPERFAMILY Protein kinase-like (PK-like) 9 286 IPR011009 -
Pumo9g02094 458 Gene3D Kinase associated domain 1, KA1 305 425 - -
Pumo9g02094 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Pumo9g02094 458 FunFam Non-specific serine/threonine protein kinase 6 309 - -
Pumo9g02094 458 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02094 458 CDD CIPK_C 312 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02094 Pumo-Chr9 52057514 52063577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02094 5 419 CBL-interacting serine-threonine protein kinases AT2G26980 80.241 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo9g02094 Pkinase 2.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02094 - - gmx:100794566 825.469