Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02093 ATGGGAAACTCCTGCAGAAAGCCAGTGGCTCATGTTTCCACAAGTTTCTTTGGAAGCGCAAAGTCTCAAAGTAAGACAAAACAGAACTCAAATTCTTCTGAAGGAAAAGCTCCTTTAAAAACTTCAGCATCAAATGTTGACAAACCCATCTCCAATAGCCTTAAGTCCTTCACCGTCAATGATCTAAGAGAGGCCACTAAGAACTTCAGGCAAGAAAACTTAATTGGAGAAGGAGGGTTTGGGTTTGTCTACAAGGGATGGATAGATGAGAACACCTGTGCTCCCACAAAACCAGGGACTGGAATTGTAGTGGCCATCAAGAAACTTAAACCAGAAAGCTTTCAAGGCCACAGAGAATGGCTGGCAGAAGTCAATTATCTAGGCCAGCTTCACCATGAAAATCTGGTGAAACTTATTGGTTACTGCTCAGATGGTAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAAAGGAAGTTTGGAAAATCATTTATTCAGAAAAGGTGTTCAACCTATTCCCTGGAATACACGGATCAACATTGCAGTTGCTGTTGCAAGAGGATTAACATTTTTACATACCCTTGATGCAAATGTTATATATCGTGATTTAAAGGCTTCCAACATCCTACTTGATTCGGATTTCAATGCAAAGCTTTCGGATTTTGGCTTGGCAAGAGATGGTCCTACTGGAGATAACACTCATGTTTCAACCAGAGTTATTGGTACTCATGGTTATGCTGCACCAGAGTATGTAGCTACAGGTCATTTGACCCCAAGAAGTGATGTATACAGCTTTGGAGTTGTGTTGTTAGAGTTACTAACAGGAAGGCGTGTAGTTGAAGATGAGAGACCTGGATTTTCAGAAGAAACACTGGTGGATTGGGCAAGGCCATTCCTGAGTGATAGCAGAAGAATTTTGAGAATCATGGATTCAAGGTTGGGTGGTCAATACTCCAAGAAAGGAGCACAAGCTGCAGCAGCACTTGTACTACAATGTCTAAATACTGATCCTAAATATAGACCAACTATGGTAAATGTTCTGGCAGCATTGGAAGAACTACATTCCTCAAATTCATTCCCAAGGACCCCAAAATCTGGAACTGAGAATCATACAACAAAGCATTCTAGTCATTCCCACAAGTCAAATAGTAACAAACTATGA 1161 0.4074 MGNSCRKPVAHVSTSFFGSAKSQSKTKQNSNSSEGKAPLKTSASNVDKPISNSLKSFTVNDLREATKNFRQENLIGEGGFGFVYKGWIDENTCAPTKPGTGIVVAIKKLKPESFQGHREWLAEVNYLGQLHHENLVKLIGYCSDGKNRLLVYEFMQKGSLENHLFRKGVQPIPWNTRINIAVAVARGLTFLHTLDANVIYRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTHGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRVVEDERPGFSEETLVDWARPFLSDSRRILRIMDSRLGGQYSKKGAQAAAALVLQCLNTDPKYRPTMVNVLAALEELHSSNSFPRTPKSGTENHTTKHSSHSHKSNSNKL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02093 386 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 155 363 - -
Pumo9g02093 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Pumo9g02093 386 Pfam Protein kinase domain 70 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02093 386 SUPERFAMILY Protein kinase-like (PK-like) 47 351 IPR011009 -
Pumo9g02093 386 ProSiteProfiles Protein kinase domain profile. 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02093 386 Gene3D Transferase(Phosphotransferase) domain 1 155 377 - -
Pumo9g02093 386 Gene3D Phosphorylase Kinase; domain 1 43 154 - -
Pumo9g02093 386 ProSitePatterns Protein kinases ATP-binding region signature. 75 108 IPR017441 GO:0005524
Pumo9g02093 386 MobiDBLite consensus disorder prediction 356 386 - -
Pumo9g02093 386 MobiDBLite consensus disorder prediction 16 47 - -
Pumo9g02093 386 CDD STKc_IRAK 75 353 - -
Pumo9g02093 386 FunFam Serine/threonine-protein kinase BIK1 36 154 - -
Pumo9g02093 386 PANTHER OS01G0588500 PROTEIN-RELATED 27 354 - -
Pumo9g02093 386 SMART serkin_6 69 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02093 Pumo-Chr9 52026888 52030869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02093 47 350 Glycoside Hydrolase AT3G07070 52.104 2.97e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo9g02093 Pkinase 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02093 - - gmx:102664409 680.633