Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02092 ATGGCAATTGCAGCCCCAGGGCAATTGAACGTGAATGAATCACCCATTTGGGGATCCAGAAGTGTTGATTGCTTCGAGAAGTTGGAGCAAATTGGCGAGGGCACATATGGTCAGGTTTACATGGCTAAAGAGATCAGAACTGGTGAAATCGTTGCTCTGAAGAAAATACGAATGGACAATGAGAGAGAGGGGTTTCCTATAACTGCTATACGAGAAATCAAAATTTTAAAGAAACTACACCATGAAAATGTGATCAAGCTGAAAGAAATTGTGACTTCACCAGGTCCTGAGAAAGATGAACAGGGGAAGCCAGATGGTAACAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCATGATTTAACAGGTCTTGCTGACCGACCTGGGATGAGATTTACAGTTCCCCAAATTAAGGTATTACTGTTAATACCAAGTATTATTTCATATATTAATATATTAATAGTTGTTCATTTTATTGTTGTCTGA 495 0.3859 MAIAAPGQLNVNESPIWGSRSVDCFEKLEQIGEGTYGQVYMAKEIRTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKVLLLIPSIISYINILIVVHFIVV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02092 164 ProSiteProfiles Protein kinase domain profile. 25 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02092 164 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Pumo9g02092 164 SUPERFAMILY Protein kinase-like (PK-like) 18 143 IPR011009 -
Pumo9g02092 164 PANTHER CELL DIVISION PROTEIN KINASE 23 144 - -
Pumo9g02092 164 SMART serkin_6 25 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02092 164 Pfam Protein kinase domain 25 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02092 164 FunFam Cyclin-dependent kinase C-2 12 121 - -
Pumo9g02092 164 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02092 Pumo-Chr9 52020243 52022292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02092 1 144 Core Cell Cycle Gene Families AT5G10270 87.586 2.65e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pumo9g02092 Pkinase 5.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02092 K08819 - gmx:100795971 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02092 9 52020243 52022292 Pumo9g02092 9 52020243 52022292 ECH