Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo9g02085 | ATGGCTGTCACCTTCTCAGATCTACACACCAAAGAGGGCATCAACTCCCTCGATCAATTCCTTTCTGGGAAAACCTATATTTCTGGGGATCAATTGACAAAGGATGATATCAAAGTGTATGCAGCTGTTGTGGAAAAGCCAGGAGACTCTTTTCCCAATGCTGCCAAGTGGTACGATGTTGTCTCTTCTCATCTTGATCCAAGCTTCCCTGGGCACGCTCAAGGGGTAAGATTCAGTGGCGCAGCTGCTCCAGCTGAAGCTGCACCTGCCAAAGCGGCTGCTACTGCTGAAGAAGATGATGATGATCTTGATCTCTTTGGTGATGAGACAGAGGAGGATAAGAAGGCAGCAGAGGAAAGGGAGGCTGCTAAAAAGCCTGCCAAGAAAAAAGAAAGTGGTAAGTCTTCCGTCCTTCTCGATGTTAAGCCCTGGGATGATGAGACTGACATGAAGAAGCTGGAAGAGGCTGTCCGCAGTGTTGAGATGCCTGGTTTATTGTGGGGAGCATCCAAACTGGTTCCAGTGGGATATGGGATCAAGAAGTTGCAGATCATGATGACCATTGTTGATGACCTTGTATCTGTGGACTCCCTCATTGAGGAATACCTGACAGTTGAGCCATGCAACGAGCATGTCCAGAGCTGTGACATTGTTGCATTCAACAAAATTTAA | 672 | 0.4732 | MAVTFSDLHTKEGINSLDQFLSGKTYISGDQLTKDDIKVYAAVVEKPGDSFPNAAKWYDVVSSHLDPSFPGHAQGVRFSGAAAPAEAAPAKAAATAEEDDDDLDLFGDETEEDKKAAEEREAAKKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEMPGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEEYLTVEPCNEHVQSCDIVAFNKI | 223 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo9g02085 | 223 | Gene3D | - | 127 | 223 | IPR014717 | - | |
Pumo9g02085 | 223 | SUPERFAMILY | GST C-terminal domain-like | 9 | 65 | IPR036282 | - | |
Pumo9g02085 | 223 | CDD | EF1B | 132 | 223 | IPR014038 | GO:0003746|GO:0006414 | |
Pumo9g02085 | 223 | MobiDBLite | consensus disorder prediction | 111 | 131 | - | - | |
Pumo9g02085 | 223 | FunFam | Elongation factor 1-beta 1 like | 128 | 223 | - | - | |
Pumo9g02085 | 223 | SUPERFAMILY | eEF-1beta-like | 131 | 223 | IPR036219 | - | |
Pumo9g02085 | 223 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 2. | 212 | 223 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Pumo9g02085 | 223 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 8 | 223 | - | - | |
Pumo9g02085 | 223 | SMART | EF1_GNE_2 | 134 | 223 | IPR014038 | GO:0003746|GO:0006414 | |
Pumo9g02085 | 223 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 99 | 107 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Pumo9g02085 | 223 | Pfam | EF-1 guanine nucleotide exchange domain | 136 | 223 | IPR014038 | GO:0003746|GO:0006414 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo9g02085 | Pumo-Chr9 | 51928018 | 51931419 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo9g02085 | 1 | 223 | Eukaryotic Initiation Factors Gene Family | AT5G12110 | 74.123 | 2.32e-107 | 306 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo9g02085 | K03232 | - | gmx:100816855 | 341.273 |