Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02064 ATGAAACAGGGAAGAAGAAGCTCCTTTGGCCCTATGGTCTCAACTGTCTCTTGTCTTCTCCTCCTTCTCTTCTGCTTCTCAGGATCTGTTGATGCTTACAAGAATTATACAGTGGGAGACTCTTTAGGATGGTTTGACAATACTGAGAAGTCCAATGTCAATTATCAGAAGTGGGCTGACAGTAAACAATTCAGCTTAGGAGATTTCCTCATTTTCAACACGGACACTAACCACTCTGTGGTTCAGACATACAATTTCACCACATACAAAGAATGTGACTATGATGATGCACAAGACAAGGACACAACCCAATGGTCAGCATCTGATCCATCCAACACCCAAACACATCCTTTGACAGTGGCAGTTCCTTTGGTGAAGGAAGGCATGACATACTTCTTCTCAGGTGATTATGATGGTGATCAATGCAAGAGTGGCCAACACTTCAAAGTAAATGTGACATATGGACAAGGGTTGCCCAAGAGTCTCAAATCCCCAGAAGATGCACCATCCCCTGCTAGTCCTGTTGCTGGAGATGATGATTCAGCACCAGACACTATTGTTCCTTCCAATTTCAGCCACCCCAAAGAAGAAAGTGATGAAGATGATGACAAAGCTAGTGACAACCAGAAATCTAGTTCTGTTTCAATCTCAATGCATGCACAACTTCACATTCTCCTATTAGGGATACTACTTTTCTTGTTTTAA 705 0.4241 MKQGRRSSFGPMVSTVSCLLLLLFCFSGSVDAYKNYTVGDSLGWFDNTEKSNVNYQKWADSKQFSLGDFLIFNTDTNHSVVQTYNFTTYKECDYDDAQDKDTTQWSASDPSNTQTHPLTVAVPLVKEGMTYFFSGDYDGDQCKSGQHFKVNVTYGQGLPKSLKSPEDAPSPASPVAGDDDSAPDTIVPSNFSHPKEESDEDDDKASDNQKSSSVSISMHAQLHILLLGILLFLF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02064 234 FunFam Early nodulin-like protein 18 33 155 - -
Pumo9g02064 234 ProSiteProfiles Phytocyanin domain profile. 34 154 IPR003245 GO:0009055
Pumo9g02064 234 Pfam Plastocyanin-like domain 44 146 IPR003245 GO:0009055
Pumo9g02064 234 CDD Phytocyanin 34 152 - -
Pumo9g02064 234 Gene3D - 33 157 IPR008972 -
Pumo9g02064 234 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Pumo9g02064 234 SUPERFAMILY Cupredoxins 34 152 IPR008972 -
Pumo9g02064 234 MobiDBLite consensus disorder prediction 159 212 - -
Pumo9g02064 234 PANTHER BLUE COPPER PROTEIN 34 192 IPR039391 GO:0009055
Pumo9g02064 234 MobiDBLite consensus disorder prediction 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02064 Pumo-Chr9 50546682 50549318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02064 13 204 Phytocyanin Superfamily AT1G08500 64.103 2.28e-86 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02064 - - gmx:100499721 404.831