Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02053 ATGGGCAACTGTTGCTCAGGTGGCACCAATGACACTGAGAACAAGGGAGAATCCAACCAACAAACCAACAACAATGGAGGCGCCACCGCAACCGCAACCACCCCACCATCATCCAAGCCTAACCACCCTCCTGCCAAGCACTCGAAGCCGGCCGCGATCGGCCCCGTGCTTGGAAGGCCAATGGAGGACGTGAGAAGCACCTACAGCATGGGGAAAGAGCTAGGGAGGGGCCAGTTTGGTGTGACACATTTGTGCACACACAAGAGCACAGGGAAGCAATTTGCATGCAAAACCATAGCCAAGAGAAAGCTTGTGAACAAGGAGGACATAGAGGATGTCAAGAGGGAGGTGCAAATCATGCACCATCTCTCAGGGCAGCCTAACATTGTGGAACTTGTTAATGTGTATGAGGACAAGCAATCTGTTCATTTGGTTATGGAGTTGTGTGCTGGTGGTGAACTCTTTGACCGCATCATTGCCAAGGGACATTACACTGAGCGTGCTGCGGCTTCCTTGTTGAGAACCATTGTGCAGATTGTCCATACGTGCCATTCCATGGGGGTCATTCATAGGGATCTTAAGCCTGAGAATTTCCTCCTGTTGAACAAGGATGAGAATGCACCCCTCAAGGCCACCGATTTTGGTCTCTCAGTTTTTTACAAGCAAGGAGAGATGTTTAAGGACATTGTTGGCAGTGCATATTACATTGCACCTGAGGTCTTGAAGAGAAAATACGGGCCAGAAGTTGACATTTGGAGTATTGGTGTCATGTTATACATTCTTCTATGCGGTGTTCCTCCATTTTGGGCAGAATCCGAAAATGGGATATTCAATGCAATCCTACGAGGCCATATTGACTTTACAAGCGATCCATGGCCATCCATTTCACCTGCAGCAAAAGATCTTGTAAGGAAAATGTTGCATTCGGATCCCAGGCAGAGGCTCACGGCCTACGAAGTTCTGAATCATCCATGGATCAAGGAGGATGGAGAAGCACCAGATACACCTCTTGACAACGCAGTGCTGAATAGACTCAAACAGTTCAGAGCAATGAACGAATTCAAGAAAGTTGCTCTAAGGGTCATCGCTGGCTGCTTATCAGAGGAAGAAATCATGGGATTGAAGCAGATGTTCAAGGGGATGGACACTGACAACAGTGGAACCATTACAATTGAAGAGCTCAAGCAAGGCCTTGCAAAACAAGGGACTAAGCTAACAGAACAGGAAGTTAAGCAATTAATGGAAGCTGCAGATGCTGATGGCAATGGTACCATAGATTACGACGAATTCATTACAGCAACAATGCACATGAACAGAATGAACAAAGAAGATCATCTTTATACTGCCTTCCAATACTTTGATAAAGATAACAGCGGGTACATTACCATCGAAGAACTAGAGCAGGCACTCCATGAGTTTAACATGCATGACGGCAGGGACATGAAGGAAATCATTTCAGAAGTTGATGCAGATAATGCAAGTCCTATACTGAATGAATTAAATACTCATAATAGTTCTAAGAGGAGTGATGGCCGGATTAACTACGATGAGTTTGCTGCAATGATGAACAAAGGAAACCTAGAAGTTGGTACCAAGAAGAGGCGTGATTCAACCTTATATTAG 1623 0.4572 MGNCCSGGTNDTENKGESNQQTNNNGGATATATTPPSSKPNHPPAKHSKPAAIGPVLGRPMEDVRSTYSMGKELGRGQFGVTHLCTHKSTGKQFACKTIAKRKLVNKEDIEDVKREVQIMHHLSGQPNIVELVNVYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGEMFKDIVGSAYYIAPEVLKRKYGPEVDIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHIDFTSDPWPSISPAAKDLVRKMLHSDPRQRLTAYEVLNHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNEFKKVALRVIAGCLSEEEIMGLKQMFKGMDTDNSGTITIEELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNKEDHLYTAFQYFDKDNSGYITIEELEQALHEFNMHDGRDMKEIISEVDADNASPILNELNTHNSSKRSDGRINYDEFAAMMNKGNLEVGTKKRRDSTLY 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02053 540 SUPERFAMILY Protein kinase-like (PK-like) 50 351 IPR011009 -
Pumo9g02053 540 ProSiteProfiles EF-hand calcium-binding domain profile. 441 476 IPR002048 GO:0005509
Pumo9g02053 540 SMART efh_1 373 401 IPR002048 GO:0005509
Pumo9g02053 540 SMART efh_1 409 437 IPR002048 GO:0005509
Pumo9g02053 540 SMART efh_1 480 525 IPR002048 GO:0005509
Pumo9g02053 540 SMART efh_1 445 473 IPR002048 GO:0005509
Pumo9g02053 540 Gene3D Phosphorylase Kinase; domain 1 70 153 - -
Pumo9g02053 540 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
Pumo9g02053 540 ProSiteProfiles Protein kinase domain profile. 68 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02053 540 SUPERFAMILY EF-hand 366 524 IPR011992 -
Pumo9g02053 540 ProSiteProfiles EF-hand calcium-binding domain profile. 405 440 IPR002048 GO:0005509
Pumo9g02053 540 Gene3D Transferase(Phosphotransferase) domain 1 154 333 - -
Pumo9g02053 540 Pfam EF-hand domain pair 444 522 IPR002048 GO:0005509
Pumo9g02053 540 Pfam EF-hand domain pair 374 434 IPR002048 GO:0005509
Pumo9g02053 540 MobiDBLite consensus disorder prediction 1 36 - -
Pumo9g02053 540 FunFam Calcium-dependent protein kinase 1 70 153 - -
Pumo9g02053 540 ProSitePatterns Protein kinases ATP-binding region signature. 74 101 IPR017441 GO:0005524
Pumo9g02053 540 CDD EFh 374 433 IPR002048 GO:0005509
Pumo9g02053 540 CDD EFh_PI-PLC 374 522 - -
Pumo9g02053 540 FunFam calcium-dependent protein kinase 1 154 333 - -
Pumo9g02053 540 ProSitePatterns EF-hand calcium-binding domain. 418 430 IPR018247 -
Pumo9g02053 540 MobiDBLite consensus disorder prediction 1 59 - -
Pumo9g02053 540 PANTHER SERINE/THREONINE-PROTEIN KINASE 63 493 - -
Pumo9g02053 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pumo9g02053 540 Pfam Protein kinase domain 68 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02053 540 SMART serkin_6 68 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02053 540 FunFam Calcium-dependent protein kinase 1 334 526 - -
Pumo9g02053 540 ProSitePatterns EF-hand calcium-binding domain. 454 466 IPR018247 -
Pumo9g02053 540 CDD STKc_CAMK 68 325 - -
Pumo9g02053 540 Gene3D - 334 526 - -
Pumo9g02053 540 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02053 Pumo-Chr9 50429319 50432075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02053 1 539 EF-hand Containing Proteins AT5G12180 78.205 0.0 888
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo9g02053 Pkinase 2.6e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02053 K13412 - gmx:100820422 988.793