Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02042 ATGGCAAACAATGTCCATGCACAATCCTTTTCTTCACCATTGCCACCACCTCCACCATCACATATCCTTGCTATCCAAGAACCAAACGAACAAATGGAACCACAACCTACTAAGGTTGCATTTGCTAAGAGGCCTAGGGGGAGGCCACCTGGCTCAAAGAATAAGCCCAAGCCAGCCATAGAGTTCCCTATCCCATCCACATTCATCTTGCAAGAAAGAGATGACTTTCTCAAACCCGTAGTATTGATTGTTCCTGCTGGCATAGACATTGTCAATGCCATCATCAGCTTCAGTCGTGACCGAGATGTTAGCATCTTGGTGCACCATGCTTCGGGTACCATCTCTGAAGTTAACCTTTGCACCCCCTTATCCCCTTCTGGTGATTTGTCTTTCAAGGGAAACTTGCATATGGTATCTCTCTCAGGCTTTTACACCAAATGCCTTTCACCTGTACCCCCTAAGAACATTCCCTTTTCCTTCTTCAACATTCAATTCTCCAGGGGAGGGCCACCCCAACTCTTTGGTGGCCTTGTTGGACACAAGCTTATTGCTGCAGAACCTGTGCAGGTCACGGCTTCTATCATCAAGAAGCATAAGTACCACAAGGTGGTGCGTCCCATCACCAATCCAAGTGTTCAACCTGGTATGAATACTACTGGTGCTAACCGCTATGTTACTATTGTGAATAATGATATCAATGGCATCATCAACAACACTGCCAATCACCCTGGTTTCTCTGTTGGAGCTTCAACCTCATCTCAAACAAATGTCTAA 774 0.4587 MANNVHAQSFSSPLPPPPPSHILAIQEPNEQMEPQPTKVAFAKRPRGRPPGSKNKPKPAIEFPIPSTFILQERDDFLKPVVLIVPAGIDIVNAIISFSRDRDVSILVHHASGTISEVNLCTPLSPSGDLSFKGNLHMVSLSGFYTKCLSPVPPKNIPFSFFNIQFSRGGPPQLFGGLVGHKLIAAEPVQVTASIIKKHKYHKVVRPITNPSVQPGMNTTGANRYVTIVNNDINGIINNTANHPGFSVGASTSSQTNV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02042 257 Gene3D - 78 213 - -
Pumo9g02042 257 ProSiteProfiles PPC domain profile profile. 74 216 IPR005175 -
Pumo9g02042 257 MobiDBLite consensus disorder prediction 1 59 - -
Pumo9g02042 257 SUPERFAMILY AF0104/ALDC/Ptd012-like 77 209 - -
Pumo9g02042 257 CDD DUF296 78 190 IPR005175 -
Pumo9g02042 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 203 IPR014476 GO:0003680
Pumo9g02042 257 Pfam Plants and Prokaryotes Conserved (PCC) domain 78 193 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02042 Pumo-Chr9 50275584 50276369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02042 37 203 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.526 3.28e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02042 - - ccaj:109792018 235.728