Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02036 ATGGAAGAATCAAGTGAATTGCAATCAGAAGAAAATAAAGTCTCCAATGAGAAAAATAAGAAAAGAAAGCTGAAAACACCGGCACAGCTTAAGGCCTTGGAGAATTTTTATAATGAGCACAAATACCCCACAGAGGAAATGAAATTAGAACTTGCTGAGGAGTTAGGATTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACAGAAGGTTAAAGGATAAAAGATTGATGAAAGATGAAGCTGTTGCTAATGGGCGACAAGATCGTTCAAGTGGTGTTATCCAGGATCGTGGCAGTGGACTTGGGCAAGATTCATGCGGAAGCAGTAAGCATGCTGATCACAGGTATCTGGATCCTAAGGAGGTTGAGAGCCATGGCCTCTACAATCACGAATTGTCAGTTGCAAATATGACCCACGGACGTAGGAACCGTTATCCTGAAAATGTTAGCGGGCTGGATGACACATCATCTGAGAGCAGCTCATTTTTGCAAGAAAGGTTGTTTTCTCAAGGTCATGATCCATATGATATGGAGCCTTCTAGACATCTTACACCTAACGGAGCTCTTCCACCCCTAAATCCCAAAGGTGTAGTTAACATGGGATACAAACCATCAGGATATTTGAAAGTGAAGGGCGAGATAGAACATGCTGCTATAACTGCTGTTAAGAAGCAATTAGGAAGGCATTATCTGGAAGATGGTCCACTACTTGGTATAGAATTCGATCCACTTCCTCCAGGGGCATTTGAATGCCAAACTGCAGATCCAGCTAATGAACCATACTCTGTTGCAAATCCTCCGCTTCCGAATTCTCCTGAAATCTCTGCTGCAAAAAGACAACCCAGTCTTAGCTCACAGAGATATGATTCGTATTATACTAAATTTAGTTCTCAAGATTCGCATATGGAAGGAGCTGACTTTGGTTCCTTGCATGAATCTGATTTCCAGGATAAACAAGATAAGAAAGCGCGCCAGAATATAAAACAAAGGCAATCTTTATACGGTTATTCCAATCAGTTTCCTGGAAGGAACTCTTTCCCGGATTTGTATGAAGACTCTACTGGAGAAGCATCTGCTTATAATAGCACTAAGAATCATAGAATGAGCACTAAACATAGTGTTGAGGGGATGCGATCTGATTCTGCTTCTAACCATAGTGATCACTATGAAGAGAAGCTTGCAGTTAAGCAGAAAGACTTGATGCTGCATGGTTATGATAACATCAATCCAAAGAATATACAAAGGAGTGAACATGTAAAATCTAAACCTTCTAGTTCAATCCGTAATTCCCGTGTTCCTATGGATACTGAAGAACGGGGGTTATCTGCTAGGATGGCAAAGGAAGAGATGTTTAAGGGGGACAGGAAAGCAAAAAATATATACCGCGATGTAGATGGAGCAGGGATGCTTCCAAATGAAATCATGGTTGCAAAACGAGCTAAAGTTGACATGCTTCAACAATACAATGTGAAAAAATCACCTGTTGCTGAGATGGAACAAAAGAAAATTCAGAGATCTGCTGCAGAAATGCCTTCTAGCTTTAGCGAGGATGAAACTGCTGACACCAGTTCCTCACTGGATTATTAA 1587 0.4096 MEESSELQSEENKVSNEKNKKRKLKTPAQLKALENFYNEHKYPTEEMKLELAEELGLTEKQISGWFCHRRLKDKRLMKDEAVANGRQDRSSGVIQDRGSGLGQDSCGSSKHADHRYLDPKEVESHGLYNHELSVANMTHGRRNRYPENVSGLDDTSSESSSFLQERLFSQGHDPYDMEPSRHLTPNGALPPLNPKGVVNMGYKPSGYLKVKGEIEHAAITAVKKQLGRHYLEDGPLLGIEFDPLPPGAFECQTADPANEPYSVANPPLPNSPEISAAKRQPSLSSQRYDSYYTKFSSQDSHMEGADFGSLHESDFQDKQDKKARQNIKQRQSLYGYSNQFPGRNSFPDLYEDSTGEASAYNSTKNHRMSTKHSVEGMRSDSASNHSDHYEEKLAVKQKDLMLHGYDNINPKNIQRSEHVKSKPSSSIRNSRVPMDTEERGLSARMAKEEMFKGDRKAKNIYRDVDGAGMLPNEIMVAKRAKVDMLQQYNVKKSPVAEMEQKKIQRSAAEMPSSFSEDETADTSSSLDY 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02036 528 MobiDBLite consensus disorder prediction 495 528 - -
Pumo9g02036 528 MobiDBLite consensus disorder prediction 416 440 - -
Pumo9g02036 528 SUPERFAMILY Homeodomain-like 16 80 IPR009057 -
Pumo9g02036 528 MobiDBLite consensus disorder prediction 88 106 - -
Pumo9g02036 528 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 527 - -
Pumo9g02036 528 MobiDBLite consensus disorder prediction 305 327 - -
Pumo9g02036 528 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Pumo9g02036 528 MobiDBLite consensus disorder prediction 82 113 - -
Pumo9g02036 528 MobiDBLite consensus disorder prediction 252 285 - -
Pumo9g02036 528 MobiDBLite consensus disorder prediction 7 23 - -
Pumo9g02036 528 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Pumo9g02036 528 SMART HOX_1 18 80 IPR001356 GO:0003677
Pumo9g02036 528 MobiDBLite consensus disorder prediction 303 340 - -
Pumo9g02036 528 MobiDBLite consensus disorder prediction 506 528 - -
Pumo9g02036 528 CDD homeodomain 20 75 IPR001356 GO:0003677
Pumo9g02036 528 Gene3D - 8 92 - -
Pumo9g02036 528 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02036 Pumo-Chr9 50156924 50164041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02036 3 527 Homeobox Transcription Factor Family AT4G03250 41.728 3.12e-94 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pumo9g02036 Homeodomain 2.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02036 - - gmx:100803515 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02036 9 50156924 50164041 Pumo9g02036 9 50156924 50164041 ECH