Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02033 ATGGCAGAGCTTAGAGCATATAAGGTTGTTGAGAAATCTAAGGTTGCTCCAACTACAAGCAGAACCATGTCTCTTCCCCTATCATTCCTTGACTTGCCTTTAGCACGTCCTATTTATGTGAAACGCCTATTCTTCTATCACTTTCCCCATCCCACACACATTTTCTATGAAACTATACTCCCCTCTCTCAAACACACACTCTCTCTTACCCTTCAACATTTCTTCCCTCTCGCTGGGAATCTCCTATGTCCACCACCACCTCACAAACCCTTCATTCGCTGCACCAATGATGACTCTGTCACCTTAACCATTGTCGAGTCCAAAGCAGATTTCAACCATCTCTCATCCAACCACCCCAAAAATCTCAAAGATTTGGACCACTTAGCTCCCATGTTGACATTCACAACCGTGCATGGTGATGATGATGACACGTACGTTTCCCCATTGGTGGCCTTGCAAGTCACGGTTTTCCCCAACCATGGCCTTTGCATTTCCATCACGAATTCTCACGTGATCATGGACGGTAGGAGTAGCTGTTATTTCATGAAATCTTGGTCTAGCATTTGTACAAGTGGTGGAGTTGACTTGACACCACCGTGCTTTGATAGGGAAGTATTGAAGGACCCCAAGGGACTCGAGGCCATCTTCTTAAGAGACTATTTTGAAGACAGGTCAACTTGGAAGGACAAACTCAAGCTCATTAGTCAAACTCCTAATCATGAGGACTATGTTAAGGCAACAATTGCCTTTGGAAGAGATGATATTGAGAGCATGAAAAGATGGGTGCTGAATCAGTTGGAAGAAAACGACGAATTGATGAAAGCGCCACAGTATCTATCAAAGTTTGTTCTTACGTGTGGCTTCATGTGGGCTAGCTGGGTTAAAGCAAAATATAGACATGATGATAATATTGAAGATGAACAAGAAGAGATTAAAGAAGAGTACTTCCGTTTTGCAGCAGATTGTAGAGATCGCTTTGAGTACCATATACCAGCAACATACGTTGGAAATTGCTTAACGAGATGTCATGCATTGCTCAAGAGAAAGGAGCTGAAGGGAGAAGGTGGTTTTGTGAATGCAGTGAAGGGCATTGCAGGGCAATAA 1104 0.4339 MAELRAYKVVEKSKVAPTTSRTMSLPLSFLDLPLARPIYVKRLFFYHFPHPTHIFYETILPSLKHTLSLTLQHFFPLAGNLLCPPPPHKPFIRCTNDDSVTLTIVESKADFNHLSSNHPKNLKDLDHLAPMLTFTTVHGDDDDTYVSPLVALQVTVFPNHGLCISITNSHVIMDGRSSCYFMKSWSSICTSGGVDLTPPCFDREVLKDPKGLEAIFLRDYFEDRSTWKDKLKLISQTPNHEDYVKATIAFGRDDIESMKRWVLNQLEENDELMKAPQYLSKFVLTCGFMWASWVKAKYRHDDNIEDEQEEIKEEYFRFAADCRDRFEYHIPATYVGNCLTRCHALLKRKELKGEGGFVNAVKGIAGQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02033 367 Pfam Transferase family 18 352 - -
Pumo9g02033 367 PANTHER - 8 365 - -
Pumo9g02033 367 Gene3D - 240 367 IPR023213 -
Pumo9g02033 367 Gene3D - 6 231 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02033 Pumo-Chr9 50131906 50134123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02033 8 351 Monolignol Biosynthesis Gene Families AT5G48930 23.496 8.93e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02033 - - gmx:100801403 662.144