Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02028 ATGGGAACTCCAACTCTTGGCCTTGTACCTGTACTCCTCCTTTTGTGCTTGGCTTGGCCTGCTTCTGTTTCTTCTCTTCCCATGTCTTTGAGAAGGCAAGCCTCTATCTTGGTTTCTCTCAAACAAGATTTTGAGGCCAACACTGATTCTTTGAGCAGCTGGGACATGTCTAACTACATGTCCCTTTGCACTTGGGAGGGCATTCAGTGTGACCAAAAGAACAGGTCAGTGGTGTCATTGGACATATCCAACCTCAACCTTTCTGGCACATTTTCACCTTCCATCACAGGACTAAGGAGCCTTGTGAGTGTCTCACTTGCTGGGAATGGCTTCTTAGGAGGGTTCCCTAGTGATATTCACAAGCTAGCAGGGTTGAGATTCCTCAACATATCCAGCAACACGTTCAGTGGAGACATGAGATGGGAATTTTCTCAGTTGAAAGAGCTTGAAGTGCTTGATGCATATGACAATGAGTTCAATTGTTCCCTCCCTCTTGGTGTCACTGAGCTCCCCAAGCTCAATAGCTTGAATTTTGGCGGGAATTATTTCTATGGTGAAATCCCTCCAAGCTATGGAGACATGGTTCAGCTCAACTTTCTGTCTCTTGCAGGAAATGATTTGAGGGGTCACATACCAACTGAGCTTGGGAATCTTACTAACCTGACACAGCTTTTCTTGGGATACTACAATCAGTTTGATGGTGGAATCCCTCCTGAGTTTGGTAAGTTGGTTAATTTAGCTCATCTTGACCTTGCAAACTGTGGTTTGATAGGTCCAATTCCGGCTGAGTTGGGAAACCTCAACAAACTAGACACTCTCTTCTTGCAAACTAACCAGCTCAGTGGCTCAATCCCTCCCCAACTAGGCAACATGAGTAGCTTGAAGTGTCTTGATTTGTCAAACAATGAGCTCACAGGAGACATCCCAAATGAGTTCTCAGGCCTTCATGAGCTCACACTTTTGAACTTGTTCATCAACAGGTTGCATGGTGAAATTCCACCTTTCATTGCTGAGCTACCTAACTTGGAAGTGCTGAAGCTTTGGCAGAACAATTTCACAGGTGCCATTCCCTCGAGGCTTGGCCAGAATGGTAAATTGGTTGAGCTTGACCTGTCAACAAACAAGCTCACTGGATTGGTGCCTAAATCTCTATGCCTTGGGAGGAGGCTAAGGATTTTGATCCTGCTCAACAATTTTCTGTTTGGATCTTTTCCTGCTGATCTTGGCCAATGCTACACACTCCAAAGAGTTCGTTTGGGACAGAACTATTTGACTGGATCAATACCAAACGGTTTTCTTTACTTGCCTGAGTTGGCCCTTCTAGAATTGCAGAACAATTACCTCAGTGGTTGGCTTCCACAAGAAACAAGCACTGCACCCTCTAAACTTGGACAGTTGAATCTATCAAACAATCGCCTATCCGGGTCTCTACCAACCTCCATTGGAAACTTTCCCAACTTGCAAATTCTGCTGCTTCATGGAAATAGACTCTCAGGAGAAATCCCTCCAGATATAGGGAGGTTGAAAAATATACTCAAGTTGGATATGAGTGTCAACAATTTTTCAGGTAGTATTCCTCCTGAGATAGGTAATTGTTTGTTGCTCACCTATTTAGATTTGAGCCAAAACCAACTATCAGGCCCTATCCCAGTTCAGCTTTCTCAAATTCACATAATGAATTATCTCAATGTCTCATGGAACCACCTAAACCAAAGTCTTCCCAAGGAACTTGGGGCAATGAAGGGCTTGACTTCAGCAGATTTTTCTCACAATGACTTCTCTGGTTCAATACCTGAGGAGGGGCAATTCTCAGTATTCAACTCTACATCCTTTATGGGAAATCCTCAGCTCTGTGGATATGAGTTGAATCCATGTAAGCATTCTTCAAATGCAGTACTGGAGTCCCAAGACAGTGGCAGTGCAAGACCTGGAGTTCCTGGGAAGTATAAGCTTCTCTTTGCAGTGGCACTGTTGGCTTGTTCATTGGCATTTGCAACCTTGGCCTTTATCAAGAGCAGAAAGCAAAGGAGGCACTCCAATTCATGGAAGCTCACAACATTTCAGAATCTGGAATATGGAAGTGAAGACATCATAGGGTGCATAAAGGAAAGCAATGTCATAGGAAGGGGTGGAGCTGGGGTTGTATACCATGGAACCATGCCAAATGGAGAGCAAGTAGCTGTAAAGAAGCTCTTGGGAATCAACAAAGGGTGTTCTCATGATAATGGCCTCTCAGCAGAAATAAGGACCCTGGGAAGAATCAGGCACAGGTACATTGTGAGGTTGCTGGCATTTTGTTCCAATAGAGAGACCAATTTGCTTGTTTATGAGTACATGCCAAATGGAAGCTTGGGTGAGGTCTTGCATGGGAAGAGGGGAGAGTTTCTCAAGTGGGACACTAGGCTTAAAATAGCAACAGAAGCTGCAAAAGGGCTTTGCTATTTGCACCATGATTGTTCCCCTCTGATAATCCACAGAGATGTGAAGTCAAACAACATATTATTGAACTCTGAATTTGAGGCTCATGTTGCTGATTTTGGACTTGCCAAGTTCTTGCAAGATACTGGGACATCAGAGTGCATGTCTTCCATTGCTGGTTCTTATGGTTACATAGCTCCAGAATATGCATACACATTGAAAGTTGATGAGAAAAGTGATGTCTATAGCTTTGGAGTGGTGCTGCTAGAACTACTAACGGGGAGAAGGCCGGTGGGGAATTTTGGTGAAGAAGGACTAGACATTGTTCAATGGACAAAGTTGCAAACAAATTGGAGCAAAGACAAAGTGGTGAAGATTCTTGATGAGAGGCTATGTCACATTCCCTTAGATGAAGCAAAGCAGGTATACTTTGTGGCCATGCTGTGTGTCCAGGAACAAAGTGTGGAGCGACCAACCATGAGAGAAGTGGTTGAAATGCTTGCACAAGCAAAGCAACCAAACACATTTCAAAAGCAGTGA 2958 0.4405 MGTPTLGLVPVLLLLCLAWPASVSSLPMSLRRQASILVSLKQDFEANTDSLSSWDMSNYMSLCTWEGIQCDQKNRSVVSLDISNLNLSGTFSPSITGLRSLVSVSLAGNGFLGGFPSDIHKLAGLRFLNISSNTFSGDMRWEFSQLKELEVLDAYDNEFNCSLPLGVTELPKLNSLNFGGNYFYGEIPPSYGDMVQLNFLSLAGNDLRGHIPTELGNLTNLTQLFLGYYNQFDGGIPPEFGKLVNLAHLDLANCGLIGPIPAELGNLNKLDTLFLQTNQLSGSIPPQLGNMSSLKCLDLSNNELTGDIPNEFSGLHELTLLNLFINRLHGEIPPFIAELPNLEVLKLWQNNFTGAIPSRLGQNGKLVELDLSTNKLTGLVPKSLCLGRRLRILILLNNFLFGSFPADLGQCYTLQRVRLGQNYLTGSIPNGFLYLPELALLELQNNYLSGWLPQETSTAPSKLGQLNLSNNRLSGSLPTSIGNFPNLQILLLHGNRLSGEIPPDIGRLKNILKLDMSVNNFSGSIPPEIGNCLLLTYLDLSQNQLSGPIPVQLSQIHIMNYLNVSWNHLNQSLPKELGAMKGLTSADFSHNDFSGSIPEEGQFSVFNSTSFMGNPQLCGYELNPCKHSSNAVLESQDSGSARPGVPGKYKLLFAVALLACSLAFATLAFIKSRKQRRHSNSWKLTTFQNLEYGSEDIIGCIKESNVIGRGGAGVVYHGTMPNGEQVAVKKLLGINKGCSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYEYMPNGSLGEVLHGKRGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGNFGEEGLDIVQWTKLQTNWSKDKVVKILDERLCHIPLDEAKQVYFVAMLCVQEQSVERPTMREVVEMLAQAKQPNTFQKQ 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02028 985 Gene3D Ribonuclease Inhibitor 233 336 IPR032675 -
Pumo9g02028 985 Gene3D Ribonuclease Inhibitor 144 232 IPR032675 -
Pumo9g02028 985 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 32 142 - -
Pumo9g02028 985 SMART LRR_typ_2 339 363 IPR003591 -
Pumo9g02028 985 SMART LRR_typ_2 267 290 IPR003591 -
Pumo9g02028 985 SMART LRR_typ_2 364 386 IPR003591 -
Pumo9g02028 985 SMART LRR_typ_2 484 508 IPR003591 -
Pumo9g02028 985 SMART LRR_typ_2 291 314 IPR003591 -
Pumo9g02028 985 SMART LRR_typ_2 194 218 IPR003591 -
Pumo9g02028 985 SMART LRR_typ_2 435 459 IPR003591 -
Pumo9g02028 985 SMART serkin_6 701 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02028 985 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 143 230 - -
Pumo9g02028 985 Pfam Leucine rich repeat 269 328 IPR001611 GO:0005515
Pumo9g02028 985 Gene3D Transferase(Phosphotransferase) domain 1 779 985 - -
Pumo9g02028 985 SUPERFAMILY L domain-like 365 625 - -
Pumo9g02028 985 SUPERFAMILY L domain-like 59 380 - -
Pumo9g02028 985 Gene3D Ribonuclease Inhibitor 338 632 IPR032675 -
Pumo9g02028 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 196 975 - -
Pumo9g02028 985 Gene3D Ribonuclease Inhibitor 32 143 IPR032675 -
Pumo9g02028 985 Pfam Protein tyrosine and serine/threonine kinase 703 973 IPR001245 GO:0004672|GO:0006468
Pumo9g02028 985 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 343 629 - -
Pumo9g02028 985 Gene3D Phosphorylase Kinase; domain 1 669 778 - -
Pumo9g02028 985 FunFam leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 isoform X1 233 335 - -
Pumo9g02028 985 ProSiteProfiles Protein kinase domain profile. 701 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02028 985 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 779 985 - -
Pumo9g02028 985 SUPERFAMILY Protein kinase-like (PK-like) 695 973 IPR011009 -
Pumo9g02028 985 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Pumo9g02028 985 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 670 778 - -
Pumo9g02028 985 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Pumo9g02028 985 Coils Coil 983 985 - -
Pumo9g02028 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02028 Pumo-Chr9 50079772 50084355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02028 23 975 Receptor kinase-like Gene Family AT5G65700 58.307 0.0 1102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo9g02028 PK_Tyr_Ser-Thr 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02028 - - gmx:100816158 1851.25