Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02010 ATGAAAAATTCTGAGAGAAGCAGTGTAAGGCAGTACAACAAATCTGAACTTCCACGCCTGCGGTGGACACCTGAACTTCATCAACACTTTGTTGAAGCTATTGAAAGTCTAGGTGGAAAACACAAGGCAACTCCAAAGAGAATTTTGCAGCAGATGCGTGTGAAAGGACTAAGGATCGCTCACATCAAAAGCCATCTTCAGATGTACAGAAACATGAAAGGACATGCCATTATTGCACCAGCGGAGGATCAGTTGCTGGAAGGAAAGGCAAACGATTTCAAACTATGCTCCATTTGTCCAACCGAAAGGATTCTCAAGCGGGAACTTCATCTGTTAGACAACAAAAATGGGCTTTCACAAACCAGTGAAGAAACTGATTATGATCTAAACCAGGAACCACAGTCAAGTGCATTGGTTAGTGATGATGTGTCAAATGAAGAAGAAAATTTTGCTGATCTATCATTCTCCTTTAGCACGCCTCTAATTTCCATGATGCAAAGTGAGAATAGCAAAGAGATAATGCGTTTTTCGTCATCAACTACACCTGCTAATCATTCCGTTCATTCTAGTTCTACGCCGTCTTTTGAAGACAATTATATAAACTTAGACCTAACAATCTGA 621 0.4042 MKNSERSSVRQYNKSELPRLRWTPELHQHFVEAIESLGGKHKATPKRILQQMRVKGLRIAHIKSHLQMYRNMKGHAIIAPAEDQLLEGKANDFKLCSICPTERILKRELHLLDNKNGLSQTSEETDYDLNQEPQSSALVSDDVSNEEENFADLSFSFSTPLISMMQSENSKEIMRFSSSTTPANHSVHSSSTPSFEDNYINLDLTI 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02010 206 FunFam Myb family transcription factor 16 74 - -
Pumo9g02010 206 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 127 IPR046955 GO:0003700
Pumo9g02010 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Pumo9g02010 206 SUPERFAMILY Homeodomain-like 18 71 IPR009057 -
Pumo9g02010 206 Gene3D - 17 74 - -
Pumo9g02010 206 NCBIfam myb-like DNA-binding domain, SHAQKYF class 18 72 IPR006447 GO:0003677
Pumo9g02010 206 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02010 Pumo-Chr9 49758526 49762755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02010 7 89 G2-like Transcription Factor Family AT2G42660 51.807 3.74e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pumo9g02010 Myb_DNA-binding 5.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02010 - - gmx:102661690 343.969