Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02007 ATGGATAACTCAAATGATTCATCATCCTTGAGTTTTGTATCATCTCACCTGTCACATGGTTCTAGTAATCACAACGTGTCTTCCTCCACCAGCAATGAGCTTGGGGCAAATATTGAAATTTTGAGTCTGAGTAAGCTCAGTGGAAGCCTTGAGAAGCTATTCATTGAGGCTGAGTATGATTATAGTGATGCTGAGATTCTTGTTGAAGACATCCCTGTGGGTATTCATCGCTGTATATTGGCGTCGCGTAGTCCGTTCTTTCATGAGCTTTTTAAGAAAGGAACTGATGGATCAGGGAAGGAAGGAAAGCCAAGGTATCTCATGTCAGATTTGGTGCCTTATGGCACAGTTGGATATGAAGCTTTCCAAGTTTTCTTGTACTATTTGTATACTGGAAGGCTGAAGGCTTCACCAACAGAAGTGACAACGTGTGTTGATGAAACATGTATCCATGATGCATGCCGTCCTGCTATCAATTATGCCTTAGAGCTGATGTATGCTTCTGCCACTTTTCAGATGAAAGAGCTGGTGTTACTTTTTCAGCGGCATCTCCTAAATTTTGTTGAGAAGGCTCTTGTGGAAGATGTCATTCCTATTCTTATGGCTGCTTTCAACTGCCAACTGGACCAGCTTCTCTCTCGGTGCATTCAGAGAGTAGCAAGGTCTGACTTTGACAACACATCTTTGGAAAAAGAGCTCCCTCATGAAGTTGTGACTGAAATCAAATCACTCCGACTCCCATCTCAGCCAGAATCCACACCTGATGCAATGGAAGTGGAGTCTTTGAATGAAAAGAGTATCAGGAGAATCCACAAGGCATTGGACTCTGATGATGTTGAGCTACTGAAGCTTCTTCTAAATGAGTCTAGTGTCACTCTAGATGATGCATATGCCCTGCACTATGCTTGTGCCTACAGTGATTCTAAGGTTATTCAAGAAGTTCTTAGTCTAGGCATGGCTGATATTGTTCGTAGAAATTCCCGAGGATACACAGTTCTTCATGTGGCTGCAAGGCGAAAGGATCCATCCATTTTGGTAGCACTGCTGAACAAAGGGGCACGTGCATCAGATTCCACTCCAGATGGACAAACTGCCCTTGCAATTTGTCAGAGGTTGACAAGACGCAAGGATTATCATGAGAAAACAGTGCAGTGTAAGGAATCTAACAAGGACAGGCTCTGTGTTGATGTCCTGGAGAGGGAGATGAGAAGAAATTCTATGACTGTGAATATGTCTGTTTCATCACAGTTAACAGCAGATGATTTGCACATGAGACTGGATTACCTTGAAGATAGAGTTGCATTTGCTCGGCTGTTGTTTCCTGCTGAGGCTAAGGTAGCCATTGAGAATGCTGAAGCAGATTCATCATCGCTGTACGTAAACTCATCGGCTTTGAAGGGCACAAATGGCAACCTGAAAGAAGTAGATCTAAATGAATCTCCCTCTGCTCGAACCAGAAAACTTCAGTTAAGATTGCATGCCCTTATGAAAACAGTTGAGAATGGTAGGCGCTTCTTTCCCCATTGCTCTGAAGTGCTTGATAAGTTTCTGGAAGACGATATGCCAGATGTTTTCTTCCTAGAGAAGGGCAGTGAAGAAGAGCAGAGAATCAAGAAAGCGCGCTTCATGGAACTTAAAGATGATGTGCAGAAGGCATTTCACAAGGATATGGCTGAAAATAACCATTCGGGTTTTTCATCTTCAGTGTCTTCCTCATCATCCTCAACTCGTAGGGAAGGTCTTAACCACAGAGTGAGGAGAAAATGA 1767 0.4318 MDNSNDSSSLSFVSSHLSHGSSNHNVSSSTSNELGANIEILSLSKLSGSLEKLFIEAEYDYSDAEILVEDIPVGIHRCILASRSPFFHELFKKGTDGSGKEGKPRYLMSDLVPYGTVGYEAFQVFLYYLYTGRLKASPTEVTTCVDETCIHDACRPAINYALELMYASATFQMKELVLLFQRHLLNFVEKALVEDVIPILMAAFNCQLDQLLSRCIQRVARSDFDNTSLEKELPHEVVTEIKSLRLPSQPESTPDAMEVESLNEKSIRRIHKALDSDDVELLKLLLNESSVTLDDAYALHYACAYSDSKVIQEVLSLGMADIVRRNSRGYTVLHVAARRKDPSILVALLNKGARASDSTPDGQTALAICQRLTRRKDYHEKTVQCKESNKDRLCVDVLEREMRRNSMTVNMSVSSQLTADDLHMRLDYLEDRVAFARLLFPAEAKVAIENAEADSSSLYVNSSALKGTNGNLKEVDLNESPSARTRKLQLRLHALMKTVENGRRFFPHCSEVLDKFLEDDMPDVFFLEKGSEEEQRIKKARFMELKDDVQKAFHKDMAENNHSGFSSSVSSSSSSTRREGLNHRVRRK 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02007 588 Pfam Ankyrin repeat 329 353 IPR002110 GO:0005515
Pumo9g02007 588 CDD BTB_POZ_NPR_plant 51 188 - -
Pumo9g02007 588 Pfam BTB/POZ domain 59 146 IPR000210 GO:0005515
Pumo9g02007 588 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 233 392 - -
Pumo9g02007 588 Gene3D Potassium Channel Kv1.1; Chain A 33 220 IPR011333 -
Pumo9g02007 588 MobiDBLite consensus disorder prediction 553 588 - -
Pumo9g02007 588 ProSiteProfiles Ankyrin repeat profile. 328 360 IPR002110 GO:0005515
Pumo9g02007 588 SUPERFAMILY Ankyrin repeat 258 371 IPR036770 -
Pumo9g02007 588 PANTHER REGULATORY PROTEIN NPR3 21 579 IPR044292 GO:0009862|GO:2000022|GO:2000031
Pumo9g02007 588 Pfam Domain of unknown function (DUF3420) 223 271 IPR024228 -
Pumo9g02007 588 ProSiteProfiles Ankyrin repeat region circular profile. 328 353 - -
Pumo9g02007 588 SMART BTB_4 62 188 IPR000210 GO:0005515
Pumo9g02007 588 Gene3D - 262 403 IPR036770 -
Pumo9g02007 588 Pfam NPR1/NIM1 like defence protein C terminal 370 572 IPR021094 -
Pumo9g02007 588 SMART ANK_2a 294 324 IPR002110 GO:0005515
Pumo9g02007 588 SMART ANK_2a 328 357 IPR002110 GO:0005515
Pumo9g02007 588 SMART ANK_2a 265 293 IPR002110 GO:0005515
Pumo9g02007 588 SUPERFAMILY POZ domain 59 186 IPR011333 -
Pumo9g02007 588 ProSiteProfiles BTB domain profile. 62 138 IPR000210 GO:0005515
Pumo9g02007 588 MobiDBLite consensus disorder prediction 560 578 - -
Pumo9g02007 588 FunFam Regulatory protein NPR3 36 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02007 Pumo-Chr9 49738140 49741957 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pumo9g02007 NPR1_like_C 4.4e-86 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02007 K14508 - gmx:100814739 1030.01