Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01988 ATGGAAGAAGGTCGCAAAGGGTATGTTCCAGTGCTAGTGGGCAAAGGGGGACATATGGAGAAGATATGGGTATCCATCAAAGCGATTCAGCATCCAACCATTGTTGAGTTGCTGGATCAGTCTGCAGATGAGTTCGGATACCAGCAGCAAGGTGTCCTCAGAATCATATACGATGTTAACAACTTCAAAGCCATTCTTGACAAGGCATCCAAGAATTCTATCTAG 225 0.4489 MEEGRKGYVPVLVGKGGHMEKIWVSIKAIQHPTIVELLDQSADEFGYQQQGVLRIIYDVNNFKAILDKASKNSI 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01988 74 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 64 IPR003676 GO:0009733
Pumo9g01988 74 Pfam Auxin responsive protein 6 66 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01988 Pumo-Chr9 49321101 49321325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01988 6 66 Calmodulin-binding Proteins AT2G24400 41.270 3.68e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01988 - K14488 pvu:PHAVU_008G194200g 110.538