Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01966 ATGTCATCCAACAGTTCTTTGAATGTGGAATTGTCAAAGAAGACGTCATTTTTGGGTTTGAAACGATGGGTTTTGATTGGGATAGGTGTTGGTGCATTTATAGTGCTGATTCTTTGTATATTATCAATATGGGTGATGTTTCGGAGAAAGTCTAGGAGATCTCTGGACAAGTCTTCTGTATCCCAAATACCAAATGTCTCAAAAGATATTGATGTTGACAAGGTTGGGGTGCAGAGTTCTCATGTTCAACCAGAAAATGTGGTTATTCCTGTTCATGACAAGGCAAGTGATAAGAATTCAGATAATGTATCAGTTCATTTGGGGAATAGCAAATCTGGTGAACCTGATAATATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCAATGTCGGCGGAAGAAGGAAGCTCTGGGAATGTTAAGAAGCAATCTACATTGTCACATGGAGGGCTGACCACTGCTTCTCCTTTAGTTGGCTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGAGATCTGGAAATGGCAACCAATCGTTTCTCAACTGAGAACATTATTGGCGAGGGTGGATATGGGATTGTTTACAGGGGCAGACTTATTAATGGAACTGAGGTGGCAGTGAAGAAGCTTCTTAACAACTTGGGACAAGCTGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTAGACATAAGCATCTTGTACGCCTTCTTGGATATTGTGTAGAAGGAGTTCATAGGCTGCTTGTGTATGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGAGACATGCACCAACATGGGACGCTTACTTGGGAGGCCCGCATGAAAGTTATACTTGGCACAGCCAAAGCGCTTGCTTATTTACATGAAGCAATAGAACCAAAAGTTATTCACCGGGATATAAAGTCTAGCAACATATTGATTGATGATGAATTCAATGCAAAGGTTTCTGATTTTGGTTTGGCCAAACTTTTGGATTCAGGAGAAAGTCACATAACCACTAGAGTAATGGGAACGTTTGGTTATGTGGCACCAGAATACGCAAACAGTGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCTTATTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCACGTCCTGCTAATGAGGTTAATCTAGTTGAATGGCTCAAAATGATGGTGGGGACAAGGAGGGCCAAAGAAGTAGTGGACTCAAGCCTTGAAGTTAAACCACCGCTACGTGCTTTGAAGCGCACTCTTTTGGTTGCACTTAGGTGTATTGATCCTGATGCGGACAAGAGGCCCAAAATGAGTCATGTTGTGAGGATGCTCGAAGTTGACGAATATCCATTCCGAGAGGATAGAAGAAACAGAGAGAGTGGCACTGCCAGCATGGAAATTGAAACCGTGAAGGATATTTCTGGTCCATCTGATGCTGAAAAGATGGGGCATTCTGAAAGCCACCTTCAAGGATAG 1521 0.4227 MSSNSSLNVELSKKTSFLGLKRWVLIGIGVGAFIVLILCILSIWVMFRRKSRRSLDKSSVSQIPNVSKDIDVDKVGVQSSHVQPENVVIPVHDKASDKNSDNVSVHLGNSKSGEPDNISQCSSIYHHERGFSSMSAEEGSSGNVKKQSTLSHGGLTTASPLVGLPEFSHLGWGHWFTLRDLEMATNRFSTENIIGEGGYGIVYRGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDMHQHGTLTWEARMKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGTRRAKEVVDSSLEVKPPLRALKRTLLVALRCIDPDADKRPKMSHVVRMLEVDEYPFREDRRNRESGTASMEIETVKDISGPSDAEKMGHSESHLQG 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01966 506 CDD STKc_IRAK 194 460 - -
Pumo9g01966 506 SUPERFAMILY Protein kinase-like (PK-like) 172 466 IPR011009 -
Pumo9g01966 506 Coils Coil 208 228 - -
Pumo9g01966 506 SMART serkin_6 188 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01966 506 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01966 506 Gene3D Transferase(Phosphotransferase) domain 1 264 474 - -
Pumo9g01966 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Pumo9g01966 506 FunFam Putative receptor-like serine/threonine-protein kinase 264 474 - -
Pumo9g01966 506 Pfam Protein kinase domain 189 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01966 506 MobiDBLite consensus disorder prediction 468 506 - -
Pumo9g01966 506 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Pumo9g01966 506 PANTHER OS01G0323000 PROTEIN 1 481 - -
Pumo9g01966 506 FunFam Putative receptor-like protein kinase 170 263 - -
Pumo9g01966 506 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
Pumo9g01966 506 MobiDBLite consensus disorder prediction 488 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01966 Pumo-Chr9 49153438 49156950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01966 19 460 Trihelix Transcription Factor Family AT1G70460 40.492 2.43e-95 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pumo9g01966 Pkinase 8.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01966 - - gmx:100778444 962.214