Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01965 ATGGCGAATGAGAAGGACCGTTTTTATGATCCTTTTCATTACAACCACCATGAGCAACTCAACCACTCATCATCAAGCTTTCCATTCTTTAGGGACAACAACAACTCAGCACCAATTAGCTCACAAAACTTTCAAGGGTTTGATCATAATAACCCTTCTTCTTCTCATCACACCACTTTCACTGACTGCTTACATGGTTCCATGGATTACAACACCCTCTCAAAAGCCTTTGACATGTCTTGCTCATCATCTGAAGTGATCTCCTCCATTGATGAAAACCCCAAGAAGCCTAGTGCAGCAGGAGACTCAGTAGGGGTCAGTGGGAACCAATCAACTACACCTATTTCATCTGTCTCTTCATCATCCAATGAAGCTGAAGCAATTATAGAAGAAGACTCAACCAAGAGCCAGAAAGATAAGCAGCAAAAAGGGTGTGATGATGGAGATGAAAAGCCTAAGAAAGAGAACAAACCCAAAAAGAAAGAGAAAAAGCCAAGAGAGCCTCGCTTTGCCTTCTTGACTAAAAGTGAGATCGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCGGTCAAGAATAGTCCATACCCAAGGAGCTATTATAGATGCACCAGTCAGAAGTGCGGTGTAAAGAAAAGGGTGGAGAGGTCATTCCAAGACCCATCAATTGTGATCACAACATATGAAGGGCAACACAACCATCACTGTCCAGCAACACTAAGAGGCAGTGCTGCTAGCATGTTGTCATCACCTTCCTTTTTTGGTTCCTCTTATATGGGGTCAAGCTTACCCCAAGAATTTCTTGCTCAGTTGCTTCCAAGTTATAGCCAAAATGATCACCAAAATCCAATGTTCCACCAAAACCTTTCCCATAATCTCCATCCCCAGCCTCAACAGCAGCAGCAGTTCCAACTCTCTCGTGACTATGGTTTGTTGCAAGACCTACTACCATCATTCCCAGGCAAACAAGAGCCATGA 990 0.4323 MANEKDRFYDPFHYNHHEQLNHSSSSFPFFRDNNNSAPISSQNFQGFDHNNPSSSHHTTFTDCLHGSMDYNTLSKAFDMSCSSSEVISSIDENPKKPSAAGDSVGVSGNQSTTPISSVSSSSNEAEAIIEEDSTKSQKDKQQKGCDDGDEKPKKENKPKKKEKKPREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCGVKKRVERSFQDPSIVITTYEGQHNHHCPATLRGSAASMLSSPSFFGSSYMGSSLPQEFLAQLLPSYSQNDHQNPMFHQNLSHNLHPQPQQQQQFQLSRDYGLLQDLLPSFPGKQEP 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01965 329 Pfam WRKY DNA -binding domain 182 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01965 329 ProSiteProfiles WRKY domain profile. 176 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01965 329 SMART WRKY_cls 181 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01965 329 FunFam WRKY transcription factor 57 167 241 - -
Pumo9g01965 329 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 38 299 IPR044810 GO:0003700
Pumo9g01965 329 MobiDBLite consensus disorder prediction 128 171 - -
Pumo9g01965 329 MobiDBLite consensus disorder prediction 103 127 - -
Pumo9g01965 329 MobiDBLite consensus disorder prediction 283 304 - -
Pumo9g01965 329 SUPERFAMILY WRKY DNA-binding domain 174 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g01965 329 MobiDBLite consensus disorder prediction 38 57 - -
Pumo9g01965 329 MobiDBLite consensus disorder prediction 88 171 - -
Pumo9g01965 329 Gene3D WRKY domain 166 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01965 Pumo-Chr9 49141078 49144397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01965 1 329 WRKY Transcription Factor Family AT4G18170 43.188 1.37e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo9g01965 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01965 - - gmx:100806016 536.954