Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01962 ATGTTTGGTGAAATGGATAGAAAGCAAGAACAAGACAAGGGGAACTCAAACATGTCTGGCATTGATGTTACTACTCTAATAACTCCCAAAGTCCCAAAAGCAGTTTCACCAGTTTCTTCTGCAGCAGAAGGGGACACCTTAAGGCGACCACGTGGCCGGCCGGCCGGCTCCAAAAACAAACCTAAGCCACCAATAATTGTCACCAGAGATAGTGCTAATGCACTGAAGGCTCATGCCATGGAAGTGAGCTCTGGCTGTGATGTGAATGAAAGTTTGTTGAACTTTGCAAGGAGAAAGCAACGCTGGCCTTTACATACTCAATGGAACAGGCTGTGTAACAAATGTAACATTGCGCCAACCAGGCTCATCTGGTGCCATTGTGACCCTTCACTGGTCGATTCGAGATTCTGTCACTGCTGGGGTCAATCCTTCCCCCACCAGCCCCTCCAGGGATCACAGGTCTCACAATTTACTTGGCAGGTGCTCAAGGGCAAGTTGTGGGAGGTGCTGTAG 513 0.4893 MFGEMDRKQEQDKGNSNMSGIDVTTLITPKVPKAVSPVSSAAEGDTLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRWPLHTQWNRLCNKCNIAPTRLIWCHCDPSLVDSRFCHCWGQSFPHQPLQGSQVSQFTWQVLKGKLWEVL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01962 170 MobiDBLite consensus disorder prediction 1 65 - -
Pumo9g01962 170 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 19 101 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01962 Pumo-Chr9 49112159 49112671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01962 31 101 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 71.831 1.53e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01962 - - gmx:100804941 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01962 9 49112159 49112671 Pumo9g01962 9 49112159 49112671 ECH