Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01957 ATGGGCCAAAGAGGCTCAGGCCTATCAGTGTCACAGTTTCCCGCCACATATATGTTGATCTTCCCGCCATCTCACACACCAATCACTTCGCTCTCGATTTCTTCGTTTTCCATCTCGCAAACACAATTCTCCGATTCAGTTCATAATTTCGGTCGCAAAGCAATGGTCCCAGAACAAGAACCCGATTTCAATCCCAATCATCTCAAGCTATATTACGGAAAGCTGTTTCCTTTTGCTGATTTAGTCAGATGGGTGTCTTATGGCAACGATGGGAAGCACCCTGGTTGTGATCAATCCTACATTGGGCGAAGAGAGTTTTCTTTCACTTTGGAGAATGATATATATCTGCGCTTCCAATCTTTCCACAATGCCCTTGAGCTCGAAAACTCCATCAAAGAAAAGTCACCTGTTAAGATAGATATTGGACCTGTCTACACCGTTGATCCTGCAAAAAGGAATGCCTATGCACAGAGTGGTGATAATAATGTCTTTGCCCCAGTTGAGAGGGAGTTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGTTGTGCGGGTGCTGATGTATGTTTGGTTTGCTGGCCATTGATGACTATAGCGATCAAAGTGATTGATACTACCTTAAGAGATGACTTTGGTTTCAAACACATTCTCTGGGTATATAGTGGACGCAGAGGTGTTCATTGTTGGGTCTGTGATGGAAAGGCAAGAAGGTTGACTAATGAGCAAAGAGGTGCTATTGCTGACTATTTTCGTGTCTACAAGGGCAATGAAAATAGTCACAAGAAGGTTTCTTTGATGGGTGATGCTCTTCATCCTTTCTTGGCGAGATCATTCACTAATGTTCTCAAGGACTATTTTGAGAAAAATCTGCTTACAGGTCAAAATTTACTTGCTACTGAGGAGAGATATGAGAAGATCCTTGACATGATTCCTGATGAATCTATTGCTTCTGAACTCAGGGGAAGATGGCAAGATAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATCAATGTTGTTCGATGGGAACAGTGCAAACAGTTGCTGCAATCTGGAAAACATAAGGCAAAAGGGCTGCGTCGGTGCGTTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGGTATCTAAACATATGAATCATTTGCTTAAAGCACCATTCTGTGTACATCCTAAAACAGGCCGTGTTTGTGTCCCTATTGATCCAAAACGGTGTGAGGAGTTTGATCCTACTACAGTACCGACCCTTTCACAGCTGATAGAAGAGCTTAATAATGAAGTCTCAAGAGCTGATGTTGATGGTGAATTGAATAGAACCTCGCTTGGAAATGCCATTACACTCTTCAGATCGTCATTCTTACAGCCTTTACTAAAAGCCTGCAAGGAGGAGATAGAAAATTCCTATAACTTAAAATTGCAACAGTCAAGGAATTCCCTTGGTTGGTAG 1467 0.4185 MGQRGSGLSVSQFPATYMLIFPPSHTPITSLSISSFSISQTQFSDSVHNFGRKAMVPEQEPDFNPNHLKLYYGKLFPFADLVRWVSYGNDGKHPGCDQSYIGRREFSFTLENDIYLRFQSFHNALELENSIKEKSPVKIDIGPVYTVDPAKRNAYAQSGDNNVFAPVERELIFDIDMSDYDDVRYCCAGADVCLVCWPLMTIAIKVIDTTLRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSHKKVSLMGDALHPFLARSFTNVLKDYFEKNLLTGQNLLATEERYEKILDMIPDESIASELRGRWQDSRRSSSAKEDINVVRWEQCKQLLQSGKHKAKGLRRCVEEIVFCFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKRCEEFDPTTVPTLSQLIEELNNEVSRADVDGELNRTSLGNAITLFRSSFLQPLLKACKEEIENSYNLKLQQSRNSLGW 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01957 488 Gene3D DNA primase, PRIM domain 53 469 - -
Pumo9g01957 488 FunFam DNA primase 55 469 - -
Pumo9g01957 488 PANTHER DNA PRIMASE SMALL SUBUNIT 59 472 - -
Pumo9g01957 488 CDD AE_Prim_S 77 417 IPR014052 GO:0003896|GO:0006269
Pumo9g01957 488 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 69 429 IPR014052 GO:0003896|GO:0006269
Pumo9g01957 488 Pfam DNA primase small subunit 173 408 IPR002755 GO:0003896|GO:0006269
Pumo9g01957 488 SUPERFAMILY Prim-pol domain 64 433 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01957 57 488 Core DNA Replication Machinery Family AT5G41880 66.744 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01957 K02684 - gmx:100780574 870.922