Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01956 ATGCGAAGCAGAGAGAGAGAAGAGCCACCCTCTCTTACAACAAACAACAGCTCATTCCTCAATCAAAAACTTTCAAAGTTTTCACTCCTTCTCCCTGTGTCGGTGTACTCTTCTTCTGGGGCATTCGTTTTTGCATCTTCAGCTCCAACATCAAACGCGCTTTTGGTGGAAGAAGCTTCACTGGGATCACTGTGGTGGTTTGGTGTTTTGAGATTGGAGGTGGGGTTTTATTTGGATTCTGTGTTTGTTGAAGGAGCTGGGCTGGGGACCGGGAGTGAGGCGTTGCATGGTGACAATGCTGATCTTTATGGTTCAATGGAGATGGAATTTTTCTCCGATTATGGTGATGCCAGCAGGTACAAAATTCAAGAGGTCATTGGAAAAGGAAGCTATGGTGTTGTTTGTTCAGCTACTGACACTCATACTGGCGAAAAAGTAGCAATTAAAAAGATTCATGATATCTTCGAGCATGTATCTGATGCTGCACGTATTCTCCGTGAGATAAAGTTGCTTAGACTTCTTCGACATCCAGATATTGTTGAAATTAAGCATGTTATGCTGCCTCCTTCTAGGAGGGACTTTAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCTGATCTGCATCAAGTCATTAAAGCCAATGATGACCTAACAAAAGAGCACTATCAATTTTTTCTTTACCAGTTACTTCGAGCATTGAAGTATATTCACACTGCAAATGTCTATCACCGAGACTTGAAGCCAAAGAATATACTGGCCAATGCAAACTGTAAACTTAAAATATGTGATTTTGGGTTAGCTAGAGTTGCTTTCAATGACACACCAACAACTGTATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCACCAGAGCTCTGTGGATCATTTTACTCAAGGTATACTCCAGCAATTGACATTTGGAGTATAGGTTGCATCTTTGCTGAAGTATTAATAGGAAAGCCTCTTTTCCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACAGATCTGCTTGGCACTCCCTCGCTGGATACTATATCCCGGGTACGCAATGATAAGGCACGGAGATACCTGACTAGTATGAGAAAAAAGCAGCCTATACCATTTGAACAAAAATTTCCTAATGCAGATCCTTTAGCACTACGGCTACTGGAAAGGTTGCTCGCCTTTGATCCAAAAGACCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAGGGGACTTGCAAAAGTTGAGAGGGAACCATCCTGCCAGCCTATTACAAAAATGGAGTTTGAATTCGAAAGGAGAAGAGTCACAAAGGAAGAAATTGGAGAGTTAATTTTCCGTGAGATTCTAGAGTACCATCCTCAACTATTGAAAGACTACATAAATGGAACAGAGAGAACTAATTTTCTTTACCCAAGTGCTGTTGATCAATTCAAACAGCAGTTTGCTCATCTTGAGGAAAATGGTGGTAAAAGTTGTCCAATTATGCCACTTGAAAGAAAACATGTATCACTACCCAGGTCAACAATTGTACATTCAAATATGGTACCCTCGAAAGAGCAATCAAGTATTGCTTCCTGCAAAAACCGGCAAACAGCTGAGGAATATAGCAATAATTCCAGGGATGCAGAAAATCCTGCGCCAAGATCCATTCAGGGTCTGCAAAAATTTCCACTAGGTATGTGA 1692 0.4125 MRSREREEPPSLTTNNSSFLNQKLSKFSLLLPVSVYSSSGAFVFASSAPTSNALLVEEASLGSLWWFGVLRLEVGFYLDSVFVEGAGLGTGSEALHGDNADLYGSMEMEFFSDYGDASRYKIQEVIGKGSYGVVCSATDTHTGEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHVMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFYSRYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPIPFEQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFRGLAKVEREPSCQPITKMEFEFERRRVTKEEIGELIFREILEYHPQLLKDYINGTERTNFLYPSAVDQFKQQFAHLEENGGKSCPIMPLERKHVSLPRSTIVHSNMVPSKEQSSIASCKNRQTAEEYSNNSRDAENPAPRSIQGLQKFPLGM 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01956 563 Pfam Protein kinase domain 120 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01956 563 MobiDBLite consensus disorder prediction 517 563 - -
Pumo9g01956 563 MobiDBLite consensus disorder prediction 517 548 - -
Pumo9g01956 563 SUPERFAMILY Protein kinase-like (PK-like) 116 415 IPR011009 -
Pumo9g01956 563 CDD STKc_TDY_MAPK 119 456 - -
Pumo9g01956 563 FunFam Mitogen-activated protein kinase 206 434 - -
Pumo9g01956 563 Gene3D Phosphorylase Kinase; domain 1 135 457 - -
Pumo9g01956 563 SMART serkin_6 120 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01956 563 Gene3D Transferase(Phosphotransferase) domain 1 206 434 - -
Pumo9g01956 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 119 449 - -
Pumo9g01956 563 ProSitePatterns MAP kinase signature. 155 258 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pumo9g01956 563 ProSitePatterns Protein kinases ATP-binding region signature. 126 150 IPR017441 GO:0005524
Pumo9g01956 563 ProSiteProfiles Protein kinase domain profile. 120 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01956 563 FunFam Mitogen-activated protein kinase 110 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01956 Pumo-Chr9 49068210 49074961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01956 104 540 MAP Kinase Gene Family AT2G42880 85.812 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pumo9g01956 Pkinase 1.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01956 - - gmx:100781115 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00985 1 15633473 15639901 Pumo9g01956 9 49068210 49074961 PCT