Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01955 ATGTCATCATCATCACCATCCATGGAACAAGAAGATAGCACTATCATACCCACATTCCTCAGAAAACCTGCAGACCAGAACAACAACAACAACAACTCTCCCACCACCCCCTCTCACAAGTCTTTGCATGTTTTCCGCCGCAGCAGGAGGCGGTGGAGGAAGGAAGTGGCAGTGAAAGAGGCTGTCAAACAAGAAGATGAAGAAAAAGAAGAAGGAGAAGATGATGATGATGGTGATGACAGAGAAGAGATAGAGAGGAAGATTCATGCATTGCAGAGGGTTGTGCCTGGTGGTGAGTCATTAGGTGTGGATAAGCTCTTTGATGAAACTGCTGGCTATATTCTTGCTTTGCAGTACCAAGTCAAAGCCTTGAGGGCTCTCACTGGCTTCTTTGAGAAGTTGGAGAAGGAGAAGACAAAGTTTGGAGGTTGA 432 0.4606 MSSSSPSMEQEDSTIIPTFLRKPADQNNNNNNSPTTPSHKSLHVFRRSRRRWRKEVAVKEAVKQEDEEKEEGEDDDDGDDREEIERKIHALQRVVPGGESLGVDKLFDETAGYILALQYQVKALRALTGFFEKLEKEKTKFGG 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01955 143 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 41 131 IPR044660 GO:0006355
Pumo9g01955 143 MobiDBLite consensus disorder prediction 1 41 - -
Pumo9g01955 143 CDD bHLH_AtIBH1_like 86 128 IPR044549 GO:0006355
Pumo9g01955 143 MobiDBLite consensus disorder prediction 1 83 - -
Pumo9g01955 143 MobiDBLite consensus disorder prediction 67 81 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01955 81 127 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 46.809 6.57e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01955 - - gmx:100306089 159.844