Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01950 ATGTTTGGGGAAATTATCTATTTTATTTTGTGGGGTTTGTTTCCCCTACTACTTTTGCTAGTCTCTTTCAATTTCTTGAGACACAAGCAATGCTACAAAGAGAAAAGAAAGCTTCCCCCAGGGGAAATGGGGTTTCCATTGATAGGGGAGACCATGGAATTCTTCAATGCTCAAAGGAGAAACCAATTGTTTGAAGAGTTTGTCCATCCTCGCATTCTGAAACATGGGAAGATCTTCAGAACAAGGATCATGGGGTCTCCAACTGTGGTTGTGAATGGAGCTGAGGCAAACAAATTCTTATTGTCTAATGAGTTCAAGTTGGTGAAAAGCTCTTGGCCTTCTTCCTCAGTTGAGCTCATGGGAAGGGACTCTATCATGGAGAAAGATGGGGAAAGGCACCGATTCCTCCGTGGTGTTATTGGCACAAGCCTTGGTTATGCTGGACTTGAGCTACTAGTTCCAAAACTGTGCAATTCTGTTCAGGTTCATTTAGCTACAAACTGGAAGGGCAAAGAAAAGATTAGTCTTTACCGTTCAACAAAAGTCCTCAGTTTTAGCATAGTGTTTGAGTGTTTGTTGGGGATCAAAGTGGAGCCAGGTATGCTGGATACCTTTGAAAGAGTGTTGGAAGGAGTGTTTTCTCCAGCAGTTATGTTACCAGGTTCTAAATTTTGGAGAGCAAAGAAGGCCAGGGTGGAGATAGAAAAGATGTTGGTCAAAGTGGTGAGAGAGAAGAGAAAGGAGATGGAAGGAAGCTTGCAAAGAGAACAAGATGGGATGTTGCTGTCCAAATTGGTATATGGGATGATCCAAGGGGATATCAGTGAAAAAGAGGTCATAGACAATGTGGTGCTACTAGTTTTTGCAGCTCATGATACTACTTCTTTTGCTGTTGCTATGACATTCAAGATGTTGGCTCAGCATCCTGATTGCTATGGAAAACTTCTTCAAGAACATGTTGCTATAATGAGCCACAAAAGCTGGGGTGAGAATCTCACAATGGAGGACATAAAGAAGATGAAGTATACCTGGCAAGTTGCTAGAGAAAGCATGAGATTGTTCCCTCCTATCTTTGGTTCTTTCAGGAAGGCTATTACTGATATTGAATATGAAGGATTCATTATACCTAGAGGATGGAAGGTGCTATGGACAACATACGGGACACATTACAATGAAGAGTATTTTAAGGATCCTATGAGTTTCAACCCAAGTAGGTTTGAGGAGGGAATACCCCAATATGCATTTGTTCCCTTTGGAGGAGGGCCAAGAGTGTGTGCAGGGTACCAATTAGCTAAGTTAAATATCCTCATATTTGTGCACTATGTTGTGACCCAATATGAGTGGTTCTTACTCCATCCAGATGAGCCAGTATCAATGGATCCCTTGCCTTTCCCTTCCCTTGGAATGCCAATCAGAATTTCTCCCAAGTACACATGA 1437 0.4203 MFGEIIYFILWGLFPLLLLLVSFNFLRHKQCYKEKRKLPPGEMGFPLIGETMEFFNAQRRNQLFEEFVHPRILKHGKIFRTRIMGSPTVVVNGAEANKFLLSNEFKLVKSSWPSSSVELMGRDSIMEKDGERHRFLRGVIGTSLGYAGLELLVPKLCNSVQVHLATNWKGKEKISLYRSTKVLSFSIVFECLLGIKVEPGMLDTFERVLEGVFSPAVMLPGSKFWRAKKARVEIEKMLVKVVREKRKEMEGSLQREQDGMLLSKLVYGMIQGDISEKEVIDNVVLLVFAAHDTTSFAVAMTFKMLAQHPDCYGKLLQEHVAIMSHKSWGENLTMEDIKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGFIIPRGWKVLWTTYGTHYNEEYFKDPMSFNPSRFEEGIPQYAFVPFGGGPRVCAGYQLAKLNILIFVHYVVTQYEWFLLHPDEPVSMDPLPFPSLGMPIRISPKYT 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01950 478 Pfam Cytochrome P450 39 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01950 478 PANTHER CYTOCHROME P450 26 33 461 - -
Pumo9g01950 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Pumo9g01950 478 Gene3D Cytochrome P450 28 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01950 478 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01950 478 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01950 478 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01950 478 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01950 478 SUPERFAMILY Cytochrome P450 32 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01950 478 FunFam Taxadiene 5-alpha hydroxylase 29 476 - -
Pumo9g01950 478 CDD CYP90-like 71 475 - -
Pumo9g01950 478 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01950 478 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01950 478 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01950 478 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01950 Pumo-Chr9 49036342 49038255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01950 38 381 Cytochrome P450 AT2G42850 66.279 1.02e-159 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01950 - - gmx:100793336 917.916