LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo9g01946	ATGGTCGCGGATGGTAGCGCCATGGTTGCGCGCGCGTCAGAGGGCAAAGATCACGCGGTGGTTTTGATGACGGGCTTTTGGATTCGGGGTTTGGGGATGGATGATTTCGGCTTTGTGAGTTTCTTCAAATCTAGGGTTCCGGCAATTGTAGCTGCCGTCACCACCGCGAATGTCACCACCGGAATAGTTGCCGCCACTCTCAGAATTGTGATGGGGAAGAATGAGTTTCTCACACCTAAAGCAATTGCCAATCGAATCAAAGCAAAAGGATTGCAGAAGCTTAGGTGGTATTGCCAGATGTGTCAGAAGCAGTGCCGAGATGAGAATGGGTTTAAATGCCATTGCATTAGTGAAGGGCACCAGCGTCAAATGCAGATTTTTGGACAAAACCCACACTGGATAATTGAGGAGGGTCCAAGTCGACGAGTACTTATTGGGGTAGCATTGGTTTCTCCCTTTGATCTTGCAGCTTGTTGGAGGGCTTATCAGGAGAATTTTCGTCTTTCAGCTGTACGTGGGATACCTGATGTCAGCATAAATTCAGAAGTTCAGACAGGTAGTGAGGCAAGACTCCAATTACCAGTTTTCTTTATGTTTGTTTTTCACTTTGGAAGATGGGATTGTGGTTGTGGTGTGGGGGTGCATGACATTAGGAATCAGGTGAGTTTGCCAGCTCGAGGCAAGATTTACATTACACTGCAGCTAAACTTACAAGATATCTTTGATGGTTAG	732	0.4672	MVADGSAMVARASEGKDHAVVLMTGFWIRGLGMDDFGFVSFFKSRVPAIVAAVTTANVTTGIVAATLRIVMGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCISEGHQRQMQIFGQNPHWIIEEGPSRRVLIGVALVSPFDLAACWRAYQENFRLSAVRGIPDVSINSEVQTGSEARLQLPVFFMFVFHFGRWDCGCGVGVHDIRNQVSLPARGKIYITLQLNLQDIFDG	243

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo9g01946	243	PANTHER	KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG	71	137	IPR037321	-
	Pumo9g01946	243	SUPERFAMILY	beta-beta-alpha zinc fingers	96	136	IPR036236	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo9g01946	Pumo-Chr9	48984261	48990021	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo9g01946	71	136	C2H2 Transcription Factor Family	AT1G55460	86.364	9.22e-39	137

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo9g01946	K13102		-	gmx:100785931	142.895