Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo9g01945 | ATGGCGGATGATGAAGGAGAAATGGTTGGTCCTCAAGTTGTTCGTGAGGGCGCAAGGAAAACCGTGTTTCCCAATTTTATGGATGTATGCGAAACTATGCATCGGGAGGCAGAGCATGTGATGGCTTTCTTGCTTGCTGAATTGGGTACGAGTGGCTCCCTTGATGGACATCAGAGATTGGTTGTGAAGGGAAAGTTTGCACCAAAGAACTTTGTAGGAATTCTGCGACGATATATCAATAATTATGTCATTTGCCTAGAGTGCAAGAGTCGGGATACTGTAATTGCCAAGGAGAATCGTCTCTTCTTGCTCCGGTGTGACAAGTGTCGATCAACAACATTAGTTCCTCCTATCAACGCTGGTTTTGTTGGTCGTGTTTGCCCGAGGAGCACGGGGTCATGA | 402 | 0.4652 | MADDEGEMVGPQVVREGARKTVFPNFMDVCETMHREAEHVMAFLLAELGTSGSLDGHQRLVVKGKFAPKNFVGILRRYINNYVICLECKSRDTVIAKENRLFLLRCDKCRSTTLVPPINAGFVGRVCPRSTGS | 133 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo9g01945 | 133 | Pfam | Domain found in IF2B/IF5 | 7 | 111 | IPR002735 | GO:0003743|GO:0006413 | |
Pumo9g01945 | 133 | FunFam | Eukaryotic translation initiation factor 2 subunit | 1 | 118 | - | - | |
Pumo9g01945 | 133 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 7 | 85 | IPR016189 | GO:0003743|GO:0006413 | |
Pumo9g01945 | 133 | Gene3D | - | 2 | 118 | - | - | |
Pumo9g01945 | 133 | SMART | eIF2Bneu4 | 3 | 112 | IPR002735 | GO:0003743|GO:0006413 | |
Pumo9g01945 | 133 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 8 | 119 | IPR045196 | GO:0003743|GO:0006413 | |
Pumo9g01945 | 133 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 82 | 116 | IPR016190 | GO:0003743|GO:0006413 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo9g01945 | Pumo-Chr9 | 48970579 | 48971098 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo9g01945 | 8 | 131 | Eukaryotic Initiation Factors Gene Family | AT5G20920 | 70.968 | 6.58e-62 | 189 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo9g01945 | K03238 | - | pop:18108950 | 193.741 |