Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01945 ATGGCGGATGATGAAGGAGAAATGGTTGGTCCTCAAGTTGTTCGTGAGGGCGCAAGGAAAACCGTGTTTCCCAATTTTATGGATGTATGCGAAACTATGCATCGGGAGGCAGAGCATGTGATGGCTTTCTTGCTTGCTGAATTGGGTACGAGTGGCTCCCTTGATGGACATCAGAGATTGGTTGTGAAGGGAAAGTTTGCACCAAAGAACTTTGTAGGAATTCTGCGACGATATATCAATAATTATGTCATTTGCCTAGAGTGCAAGAGTCGGGATACTGTAATTGCCAAGGAGAATCGTCTCTTCTTGCTCCGGTGTGACAAGTGTCGATCAACAACATTAGTTCCTCCTATCAACGCTGGTTTTGTTGGTCGTGTTTGCCCGAGGAGCACGGGGTCATGA 402 0.4652 MADDEGEMVGPQVVREGARKTVFPNFMDVCETMHREAEHVMAFLLAELGTSGSLDGHQRLVVKGKFAPKNFVGILRRYINNYVICLECKSRDTVIAKENRLFLLRCDKCRSTTLVPPINAGFVGRVCPRSTGS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01945 133 Pfam Domain found in IF2B/IF5 7 111 IPR002735 GO:0003743|GO:0006413
Pumo9g01945 133 FunFam Eukaryotic translation initiation factor 2 subunit 1 118 - -
Pumo9g01945 133 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 7 85 IPR016189 GO:0003743|GO:0006413
Pumo9g01945 133 Gene3D - 2 118 - -
Pumo9g01945 133 SMART eIF2Bneu4 3 112 IPR002735 GO:0003743|GO:0006413
Pumo9g01945 133 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 8 119 IPR045196 GO:0003743|GO:0006413
Pumo9g01945 133 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 82 116 IPR016190 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01945 Pumo-Chr9 48970579 48971098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01945 8 131 Eukaryotic Initiation Factors Gene Family AT5G20920 70.968 6.58e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01945 K03238 - pop:18108950 193.741