Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01940 ATGGCTGCAAACGTTACTTCCAGATTTTCTCTTCTGGGCCGTTCTTTGCTTGGTGGATTAAGGAATAATAACTTCTCTGGTTCATTAACATCGCATGAGATAACATCTAGCAATTTCTTATCCCAGCAGCAGCAACAACGCACATTCATACAGATGAGGACGGTTCTGAAGGTGGTTGATAATTCGGGGGCAAAAAAAGTGATGTGCATTCAAGCATTGAAAGGGAAGAAGGGGGCAAGGTTAGGTGACACAATAATAGCATCAGTGAAGGAGGCCCATCCGAATGGAAAAGTAAAGAAAGGAAAGGTGGTGTATGGTGTGGTTGTGCGTGCTGCCATGCAAAGGGGAAGATGTGATGGAAGTGAGGTCAAGTTTGATGACAATGCTGTGGTGCTTGTGGACAAGCAAGGCCAACCCATTGGGACTAGAGTTTTTGGCCCAGTGCCCCATGAGCTCAGGCAGAAGAAGCACGTCAAGATTCTTACTTTGGCCGGCCACATTGCTTGA 507 0.4635 MAANVTSRFSLLGRSLLGGLRNNNFSGSLTSHEITSSNFLSQQQQQRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01940 168 SUPERFAMILY Ribosomal protein L14 50 167 IPR036853 GO:0003735|GO:0005840|GO:0006412
Pumo9g01940 168 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 50 167 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pumo9g01940 168 FunFam 50S ribosomal protein HLP, mitochondrial-like 49 168 - -
Pumo9g01940 168 SMART Ribosomal_L14_2 49 168 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pumo9g01940 168 Pfam Ribosomal protein L14p/L23e 50 167 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pumo9g01940 168 Hamap 50S ribosomal protein L14 [rplN]. 49 168 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pumo9g01940 168 ProSitePatterns Ribosomal protein L14 signature. 106 132 IPR019972 -
Pumo9g01940 168 NCBIfam 50S ribosomal protein L14 50 167 IPR005745 GO:0003735|GO:0006412|GO:0015934
Pumo9g01940 168 Gene3D Ribosomal protein L14 49 168 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01940 Pumo-Chr9 48882626 48884265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01940 60 151 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.364 3.54e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01940 K02874 - qsu:111987454 236.498