Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01936 ATGGAAACCAAGAAGCTCCAGCCTCGCTTCTCGCTCGGTCGTCAGTCCTCCCTCGCGCCGGAGCGCGCCGGCGCCGGCGACGCGTCGGAGGCGCTGGACCCGGCGGTCCGGTTGATGTATCTGGCCAACGAAGGTGACTTGGACGGGATTAAGGAGCTCTTGGACGCCGGGAGTGACGTCAACTTCACCGACATTGACGGCCGCACCGCGCTCCACGTCGCCGCCTGCAATGGCCGCACCGACGTTGTCGATTGGCTGCTCCGACGAGGCGCCGACGTCGATCCACAAGACCGCTGGGGCAGCACCCCTCTAGTCGATGCAATGTACTACAAAAATCACGACGTTGTCAAGCTTTTGGAGAAACACGGTGCAAGACTCCCGGTGGCTCCTATGCATGTGCAGAATGCTCGTGAAGTCCCAGAGTATGAGATTGATCCTTCTGAACTCGATTTTACTAATAGCGTTTGCATAACAAAGGGAACTTTCCGGATTGCATTATGGCGTGGAACTCAGGTTGCTTTCAAGACGCTTGGGGAGGAAGTGTTCACTGATGATGATAAAGTAAAGGCATTTCATGATGAGCTTACATTACTTGAGAAAATAAGGCATCCAAATGTCGTCCAGTTTCTGGGTGCTGTAACACAGAGCACCCCTATGATGATCGTCACAGAGTATCTACCCCAGGGGGATCTTCGTGCCTACTTGAAGCGGAAAGGTGCATTCAAAACCAGTAACAGCTGTAAAGTTTGCACTTGA 756 0.5384 METKKLQPRFSLGRQSSLAPERAGAGDASEALDPAVRLMYLANEGDLDGIKELLDAGSDVNFTDIDGRTALHVAACNGRTDVVDWLLRRGADVDPQDRWGSTPLVDAMYYKNHDVVKLLEKHGARLPVAPMHVQNAREVPEYEIDPSELDFTNSVCITKGTFRIALWRGTQVAFKTLGEEVFTDDDKVKAFHDELTLLEKIRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLRAYLKRKGAFKTSNSCKVCT 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01936 251 Pfam Protein tyrosine and serine/threonine kinase 168 248 IPR001245 GO:0004672|GO:0006468
Pumo9g01936 251 SUPERFAMILY Ankyrin repeat 37 129 IPR036770 -
Pumo9g01936 251 FunFam serine/threonine-protein kinase STY46-like 144 227 - -
Pumo9g01936 251 Gene3D - 27 138 IPR036770 -
Pumo9g01936 251 PRINTS Ankyrin repeat signature 115 129 IPR002110 GO:0005515
Pumo9g01936 251 PRINTS Ankyrin repeat signature 67 82 IPR002110 GO:0005515
Pumo9g01936 251 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Pumo9g01936 251 PIRSF ILK 2 250 - -
Pumo9g01936 251 FunFam Integrin-linked protein kinase family 17 142 - -
Pumo9g01936 251 Pfam Ankyrin repeats (3 copies) 38 125 IPR002110 GO:0005515
Pumo9g01936 251 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 84 238 - -
Pumo9g01936 251 ProSiteProfiles Protein kinase domain profile. 151 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01936 251 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
Pumo9g01936 251 SMART ANK_2a 33 62 IPR002110 GO:0005515
Pumo9g01936 251 SMART ANK_2a 66 95 IPR002110 GO:0005515
Pumo9g01936 251 SMART ANK_2a 99 128 IPR002110 GO:0005515
Pumo9g01936 251 MobiDBLite consensus disorder prediction 1 26 - -
Pumo9g01936 251 SUPERFAMILY Protein kinase-like (PK-like) 156 240 IPR011009 -
Pumo9g01936 251 Gene3D Phosphorylase Kinase; domain 1 143 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01936 Pumo-Chr9 48841455 48843999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01936 1 248 MAP Kinase Kinase Kinase AT3G58760 64.684 1.55e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pumo9g01936 PK_Tyr_Ser-Thr 6.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01936 - - gmx:100795964 458.759