Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01932 ATGGAGCCCAACTTGGGTTGTTCCAGGATGCTCTTTTTACTCCTCCTTGGTTCCACTTCATTGATTTTCTTCCCACACTTGGCTTCTGCTGCTACTCCCAAGCTTAACACTCAAGAGGTGAAGGCATTGAAGGAGATAGGGAGCAAGATTGGGAAGAAGGACTGGGACTTTGGGGTGGATCCTTGCAGTGGAAAAGGGAATTGGAATGTGTCTGATGCTAGGAAAGGCTTTGAGAGTTCTGTCATATGTGATTGTTCCTTCAATCACAATTCTTCTTGCCATGTTGTAAGCATATCCTTGAAGGCTCAGAATCTGTCTGGTAGTCTCTCACCAGAGTTTTCCAAGCTTCACCATCTCCAACAATTGGACCTTAGTCGTAACATCATCACTGGTTCTATACCTACACAATGGGGTACCATGCGCTTGGTTGGGCTCTCTTTTATGGGAAACAAATTGTCAGGGCCATTCCCTAAAGTTCTCACCAATATCACAACCCTCAGAAACTTGAGTATTGAAGGAAATCAATTTTCAGGCAACATTCCAACGGAGATTGAGAAGTTGACCAATTTAGAAAAATTCGTTCTGTCATCCAATGGATTCACAGGAGCATTGCCACCCGCACTTTCCAAGTTGACCAAGTTGGTTGATTTGAGGATAAGCGACAATAATTTCTTTGGGAAGATACCTGATTTCATTAGTAATTGGACATTGATTGAAAAGCTGCATATGCATGGTTGCTCTCTTGAGGGGCCCATACCTTCTAGCATTTCTGCCTTGACAAAATTAAGTGATTTGAGGATAACTGACCTAAAAGGTGATAAAAGCTCAGCCTTCCCACCACTATATAACTTGAAATCCATGAAGACATTGGTATTGAGAAAATGCATGATTAAAGGAGAAATCCCTGAATATATTGGGAGAATGGAAAAACTGAAAATCTTAGATTTGAGCTACAATAGCTTGAGTGGAGAGATACCTGAATCTTTTGCGGAACTTGACAAAGTAGACTTCATGTATCTTACTGGAAACAAGTTATCAGGGATTATACCTGGCTGGGTCCTTGGAAATAACAAAAATATTGATGTCTCTGACAATAACTTCTCCTGGGATAGCTCAAGTCCAACTGAATGTCAACGAGGGAGCATAAACCTTGTTGAGAGCTACTCTTCATCTGTAAATACACAAAATAAGATTCATTCATGCTTAAAAAGGAACTTTCCATGCCCTGCTTCAGTTAGCCAATATCAGTACTCCATGAACATTAATTGTGGTGGTATGGAAGCAAATGTTAGTGGTCGTATTTATGAAGCTGACAGAGAACAAAAGGGTGCTGCAATGTTATATTACACTGGCCAGGATTGGGCTCTTAGTAGCACTGGAAACTTCATGGACAATGATATTGACTCTGATCCATATATTGTGGCCAATACTTCTAAACTTAATAATAATGTCTCTGCACTCAATTCACAACTATACACAACAGCGCAGATTATTTTCATCAATGATAGGTCACTTAACAGTCTTGGGAGGCGAGTATTTGACGTCTATATCCAGGGGAATATAGTGCTGAAAGACTTTGATATCCAAAGAGAAGCTGGTGGTACTGGCAAACCAATTGTGAAGACATTCAATGCTAGTGTCACCCAACATACTTTGAAGATTCACTTATACTGGGCTGGAAAAGGAACCACTGGCATACCCACAAGAGGAGTTTATGGACCTCTAGTATCTGCTATTTCAGTAAACCCTAATTTTAAACCTCCATCTAGGGATGGCAACAGAACTTATGTCATTATGGCCATCGGCATAGCCGCTGGCATTTTAGTTGTTGTTCTTCTGGTGCTGGTTCTCATGAGGAGGATGGGATGGTTAGGAGGCAAAGATCCAGTGTATAAAGAGCTCAGGGGCATAGATCTGCAGACGGGATTATTTACACTAAGACAAATCAAATCAGCAACCAAAAACTTTGATGCAGAGAATAAAATTGGCGAAGGTGGCTTTGGTTGTGTTTACAAGGGCCTACTATCAGATGGTACAATAATAGCAGTAAAGCAGCTCTCTTCAAAATCTAAACAAGGAAATCGTGAGTTTGTGAATGAGATGGGAATGATATCTGGACTTCAACATCCCAATCTTGTTAAGCTTTATGGATGTTGTGTGGAGGGCAACCAGCTAATACTGATATATGAGTATATGGAAAATAATTGTCTATCTCGCGTTCTTTTTGGGAGGGATCCAAACAGAACAAAACTAGACTGGCCAACAAGGAAGAAAATTTGTCTTGGTATAGCTAAAGCTTTGGCTTATCTTCATGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGGCAAGTAATGTATTGCTCGACAAGGATTTTAATGCTAAAGTCTCAGATTTTGGCTTGGCAAAACTTATTGAAGATGACAAAACCCATATTAGCACTCGAGTTGCAGGAACAATGTAA 2469 0.4026 MEPNLGCSRMLFLLLLGSTSLIFFPHLASAATPKLNTQEVKALKEIGSKIGKKDWDFGVDPCSGKGNWNVSDARKGFESSVICDCSFNHNSSCHVVSISLKAQNLSGSLSPEFSKLHHLQQLDLSRNIITGSIPTQWGTMRLVGLSFMGNKLSGPFPKVLTNITTLRNLSIEGNQFSGNIPTEIEKLTNLEKFVLSSNGFTGALPPALSKLTKLVDLRISDNNFFGKIPDFISNWTLIEKLHMHGCSLEGPIPSSISALTKLSDLRITDLKGDKSSAFPPLYNLKSMKTLVLRKCMIKGEIPEYIGRMEKLKILDLSYNSLSGEIPESFAELDKVDFMYLTGNKLSGIIPGWVLGNNKNIDVSDNNFSWDSSSPTECQRGSINLVESYSSSVNTQNKIHSCLKRNFPCPASVSQYQYSMNINCGGMEANVSGRIYEADREQKGAAMLYYTGQDWALSSTGNFMDNDIDSDPYIVANTSKLNNNVSALNSQLYTTAQIIFINDRSLNSLGRRVFDVYIQGNIVLKDFDIQREAGGTGKPIVKTFNASVTQHTLKIHLYWAGKGTTGIPTRGVYGPLVSAISVNPNFKPPSRDGNRTYVIMAIGIAAGILVVVLLVLVLMRRMGWLGGKDPVYKELRGIDLQTGLFTLRQIKSATKNFDAENKIGEGGFGCVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEMGMISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRVLFGRDPNRTKLDWPTRKKICLGIAKALAYLHEESRIKIIHRDIKASNVLLDKDFNAKVSDFGLAKLIEDDKTHISTRVAGTM 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01932 822 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 822 - -
Pumo9g01932 822 FunFam Os07g0541700 protein 732 821 - -
Pumo9g01932 822 Pfam Protein kinase domain 658 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01932 822 Gene3D Ribonuclease Inhibitor 38 198 IPR032675 -
Pumo9g01932 822 ProSiteProfiles Protein kinase domain profile. 656 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01932 822 Pfam Leucine rich repeat 287 345 IPR001611 GO:0005515
Pumo9g01932 822 SUPERFAMILY Protein kinase-like (PK-like) 641 821 IPR011009 -
Pumo9g01932 822 Gene3D - 414 584 - -
Pumo9g01932 822 Gene3D Transferase(Phosphotransferase) domain 1 732 822 - -
Pumo9g01932 822 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 235 383 - -
Pumo9g01932 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Pumo9g01932 822 ProSitePatterns Protein kinases ATP-binding region signature. 662 684 IPR017441 GO:0005524
Pumo9g01932 822 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 626 731 - -
Pumo9g01932 822 Gene3D Ribonuclease Inhibitor 199 272 IPR032675 -
Pumo9g01932 822 Gene3D Ribonuclease Inhibitor 273 380 IPR032675 -
Pumo9g01932 822 Gene3D Phosphorylase Kinase; domain 1 630 731 - -
Pumo9g01932 822 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 41 204 - -
Pumo9g01932 822 SUPERFAMILY L domain-like 82 368 - -
Pumo9g01932 822 Pfam Malectin domain 418 579 IPR021720 -
Pumo9g01932 822 SMART serkin_6 656 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01932 Pumo-Chr9 48815235 48826375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01932 40 822 Receptor kinase-like Gene Family AT1G53430 49.630 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo9g01932 Pkinase 5.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01932 - - gmx:100784864 1484.93