Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01920 ATGAGTTTCTTTTCATGTTGCACGTCACAAGAGAAGATCGACAAGAACTCATTGAAAAGGAGCAGTAAGAACTACCATCACGGAAAAGCTCTGCCATCATTTGCCAACCTGTGTTTTAAATCTGATAGCAGCAAGCGGAAGTACATAGAAGAAGAAATAGCAAAAATCGGAAAAGGGAATATTACCTCTCAGATTTTTTCTTATCACGAGTTATGTGTTGCAACTCGGAACTTTCACCCTGAAAATATGATTGGTGAAGGAGGCTTCGGGAGGGTATACAAAGGACGCCTTAAAAGCATAAATCAGGTTGTTGCTGTGAAGAAACTTAACAGGAATGGATTCCAAGGAAACAGAGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTCTTGCACCACCCTAACCTTGTCAATTTGGTAGGGTATTGTGCAGATGGTGACCAAAGGATTTTGGTGTACGAGTACATGGTGAACGGTTCTTTAGAAGATCACCTTCTTGAACTACCTCCGGACAGAAAGCCTTTGGACTGGCGTACTAGAATGAACATTGCAGCAGGTGCAGCTAAAGGACTTGAATATTTACATGAAGTCGCAAATCCGCCTGTGATATACCGTGATTTCAAAGCATCAAACATACTATTAGATGAAAACTTCAATCCAAAGCTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACTGGTGATAAAACTCATGTATCCACCAGGGTGATGGGAACTTATGGCTACTGTGCACCTGAGTATGCCTCAACAGGTCAATTGACTACAAAATCAGATATATATAGCTTTGGAGTAGTGTTTCTAGAGATGATCACAGGAAGAAGAGCAATTGATCAGTCAAGACCATCTGAAGAGCAAAACTTAGTCACTTGGGTATGTCACGAAGCTTTTATTATGTGCCTAAATTCTCTGGCATAA 933 0.4051 MSFFSCCTSQEKIDKNSLKRSSKNYHHGKALPSFANLCFKSDSSKRKYIEEEIAKIGKGNITSQIFSYHELCVATRNFHPENMIGEGGFGRVYKGRLKSINQVVAVKKLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGDQRILVYEYMVNGSLEDHLLELPPDRKPLDWRTRMNIAAGAAKGLEYLHEVANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDIYSFGVVFLEMITGRRAIDQSRPSEEQNLVTWVCHEAFIMCLNSLA 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01920 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Pumo9g01920 310 FunFam Serine/threonine-protein kinase PBS1 155 302 - -
Pumo9g01920 310 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Pumo9g01920 310 ProSiteProfiles Protein kinase domain profile. 78 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01920 310 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Pumo9g01920 310 Pfam Protein kinase domain 79 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01920 310 Gene3D Transferase(Phosphotransferase) domain 1 155 307 - -
Pumo9g01920 310 CDD STKc_IRAK 84 297 - -
Pumo9g01920 310 SUPERFAMILY Protein kinase-like (PK-like) 64 299 IPR011009 -
Pumo9g01920 310 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Pumo9g01920 310 PANTHER OS07G0668900 PROTEIN 21 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01920 Pumo-Chr9 48507051 48509465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01920 60 297 Glycoside Hydrolase AT3G07070 74.370 5.27e-134 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pumo9g01920 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01920 - - gmx:100798032 591.652