Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01907 ATGAGTGGAGTGGGGATTGATATTGGAAACGAGAATTGTGTAATTGCTGCAGTGAAGCAACGTGGGATTGATGTTTTGCTGAATGATGAATCCAAACGTGAAACCCCGGCCGTGGTGTGCTTTGGAGAGAAGCAACGGTTTATAGGGTCAGCTGGTGCTGTTTCTGCTATGATGCACCCCAAGTCCACAATATCTCAAGTGAAGAGACTAATAGGCACGAGATTTGCAGACCCTGATGTTCAAAATGAGTTAAGAATGCTCCCCGTTGAAACTTCAGAAGGCCCTGGATGGTGGCATTCTGATTCACTTGAAATACTTGAAGGAGACTCATGCGTTTACCCCGGTTCAAATAGTAGCAATGCTCTTAGCTCACTTGAAGACTATAGCTGA 390 0.4513 MSGVGIDIGNENCVIAAVKQRGIDVLLNDESKRETPAVVCFGEKQRFIGSAGAVSAMMHPKSTISQVKRLIGTRFADPDVQNELRMLPVETSEGPGWWHSDSLEILEGDSCVYPGSNSSNALSSLEDYS 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01907 129 Gene3D - 38 96 - -
Pumo9g01907 129 Gene3D - 5 37 - -
Pumo9g01907 129 Pfam Hsp70 protein 4 93 IPR013126 GO:0005524|GO:0140662
Pumo9g01907 129 SUPERFAMILY Actin-like ATPase domain 3 97 IPR043129 -
Pumo9g01907 129 PANTHER HSC70CB, ISOFORM G-RELATED 1 95 - -
Pumo9g01907 129 FunFam Heat shock 70 kDa protein 4 38 100 - -
Pumo9g01907 129 FunFam Heat shock 70 kDa protein 4 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01907 Pumo-Chr9 48207726 48208115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01907 3 96 Calmodulin-binding Proteins AT5G02500 32.979 1.28e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01907 K09489 - gmx:100795914 177.563