Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01898 ATGGAAGGAGTTATTGTCAGAAGAGTCATTCCTTCGGATAACAGTTGCCTCTTCAATGCAGTTGGATATGTTATGGATCATGACAAGAAGAAAGCTGCTGAGTTGAGACAGGTTATAGCTGCAACAGTAGCAAGTGATCCACAGAAATATTGTGAAGCATTTCTTGGGAAGCCAAACGCAGAATATTGTAACTGGATTCTTGACCCGGAGAAGTGGGGAGGTGCAATTGAACTTTCAATATTAGCAGATTATTATGGACGTGAAATTGCAGCATATGATATCCAGACAACTCGATGTGATTTGTATGGTCAGGAAAGTAACTATTCTGAAAGAGTAATGCTGATTTATGATGGTCTCCACTATGATGCATTAGTGGTGTCTCCCTTTGAGGAAGCTCCTGAGGAGTTTGATCAGACCATATTTGCTGTACAGAAAAACAGAAGCATTGAACCTGTTGAGGGGCTTGCTCTAAATTTTGTGAAGGACCAGCGGAGTAAACGGAGTTACACTGACACTGCCAACTTCACTCTGCGCTGTGGAGTATGCCAAATTGGAGTAATTGGTCAGAAGGAGGCAGTGGAGCATGCACAAGCAACTGGTCATGTTAACTTCCAAGAGTATAGATGA 627 0.4226 MEGVIVRRVIPSDNSCLFNAVGYVMDHDKKKAAELRQVIAATVASDPQKYCEAFLGKPNAEYCNWILDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQESNYSERVMLIYDGLHYDALVVSPFEEAPEEFDQTIFAVQKNRSIEPVEGLALNFVKDQRSKRSYTDTANFTLRCGVCQIGVIGQKEAVEHAQATGHVNFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01898 208 Gene3D - 1 173 - -
Pumo9g01898 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Pumo9g01898 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 - -
Pumo9g01898 208 SUPERFAMILY Cysteine proteinases 7 125 IPR038765 -
Pumo9g01898 208 CDD OTU_plant_OTU1_2-like 3 163 - -
Pumo9g01898 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
Pumo9g01898 208 Pfam OTU-like cysteine protease 12 104 IPR003323 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01898 1 208 C2H2 Transcription Factor Family AT1G50670 82.692 2.92e-130 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01898 K13719 - gmx:100793701 410.609