Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01895 ATGGGTTGTTGTCTGAGTAAAAAAGGGTCAGAGCCAGAAGAACACATTGGTTACAGACATGCTGCTGGGGGTGCTGGTGTGTACAATCACAAGAGCCATGAACCCTTTGTCACCCAAACCAAACCCCCTTCTCATCAGCCTTACCAATTACCTGAGAAACATGCTCCTCAGGCCCCTTGGAGGCCTCCCCCAAGCCCAAAACATGTTCACAAGCATGACACAATCACTGGGAAGCCTTTTGAGGATGTAAAGCAGCACTACACACTTGGGAAGGAACTGGGGAGAGGCCAATTTGGGGTGACTTATCTCTGCACTGAAAATTCAACTGGCCTGCAGTATGCCTGCAAGTCCATTTCAAAGAGGAAGCTTGTGAGCAGGGCTGACAAGGAGGACATGAAGAGGGAGATTCAAATTATGCAGCATTTGAGTGGACAATCCAACATTGTGGAGTTCAAAGGTGCTTATGAGGATAAGCAAACAGTTCATGTGGTTATGGAGCTGTGTGCAGGTGGTGAACTTTTTGATAGGATTATTGCCAAGGGGCACTACAGTGAAAGAGCTGCTGCTTCAATATGTAGACAGGTTGTTAAAGTTGTTAATACCTGCCATTTTATGGGTGTCATGCATAGGGATCTGAAGCCAGAGAATTTCTTGTTATCCAGTAAGGATGACAAGGGACTTCTCAAGGCCACAGATTTTGGCTTGTCAGTCTTCATTGAAGAAGGAAAGGTGTATCGAGATATAGTTGGCAGTGCTTACTATGTTGCTCCAGAAGTTCTACATCGTAGCTATGGGAAGGAGGCAGATATATGGAGTGCAGGAGTTATATTGTATATCTTACTTAGTGGCGTACCTCCATTTTGGGCAGAGACGGAAAAGGGAATATTTGATTCCATATTGCAAGGTCATATTGATTTTGAAAGTAGTCCATGGCCAAGCATATCAAACAGTGCTAAGGACCTTGTTCACAAGATGCTTATAAAGGATCCAAAGAAACGCATTACTGCTGCTCAGGTTCTAGAGCACCCATGGCTTAAAGAAGGTGGAAATGCTTCTGACAAGCCAATTGACAGTGCAGTGCTTTCCAGAATGAAGCAATTCAGAGCAATGAATAAACTTAAAAAAACTAGCCCTCAAGGTCATTGCTGA 1149 0.443 MGCCLSKKGSEPEEHIGYRHAAGGAGVYNHKSHEPFVTQTKPPSHQPYQLPEKHAPQAPWRPPPSPKHVHKHDTITGKPFEDVKQHYTLGKELGRGQFGVTYLCTENSTGLQYACKSISKRKLVSRADKEDMKREIQIMQHLSGQSNIVEFKGAYEDKQTVHVVMELCAGGELFDRIIAKGHYSERAAASICRQVVKVVNTCHFMGVMHRDLKPENFLLSSKDDKGLLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLHRSYGKEADIWSAGVILYILLSGVPPFWAETEKGIFDSILQGHIDFESSPWPSISNSAKDLVHKMLIKDPKKRITAAQVLEHPWLKEGGNASDKPIDSAVLSRMKQFRAMNKLKKTSPQGHC 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01895 382 FunFam Calcium-dependent protein kinase 1 89 172 - -
Pumo9g01895 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pumo9g01895 382 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Pumo9g01895 382 Gene3D Transferase(Phosphotransferase) domain 1 174 380 - -
Pumo9g01895 382 ProSiteProfiles Protein kinase domain profile. 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01895 382 SUPERFAMILY Protein kinase-like (PK-like) 63 365 IPR011009 -
Pumo9g01895 382 FunFam calcium-dependent protein kinase 1 173 352 - -
Pumo9g01895 382 PANTHER SERINE/THREONINE-PROTEIN KINASE 81 374 - -
Pumo9g01895 382 Pfam Protein kinase domain 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01895 382 MobiDBLite consensus disorder prediction 25 72 - -
Pumo9g01895 382 Gene3D Phosphorylase Kinase; domain 1 89 173 - -
Pumo9g01895 382 SMART serkin_6 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01895 382 CDD STKc_CAMK 86 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01895 Pumo-Chr9 48114581 48117772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01895 31 377 EF-hand Containing Proteins AT3G20410 73.901 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo9g01895 Pkinase 1.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01895 K13412 - gmx:100794852 723.005