Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01853 ATGGAATTGTTTCATAAACCAATGACTTTCCTTCTAATCTTGCTTGTTACTTGTTTCTTTTGTCTTGGTAACGCCATAGATTGTGGTGGGAAGAATGTTACTTATACCATCATTGTAGGTCGATATGGCAAAGTAGCATTTAGAACAATTCAAGAAGCCATTGATTCTGTAAAGAGTAACAATGATCGATGGGTCAAGATTCACATAAACGCCGGCTTATACATAGAAAGGATATCTATTCCCCTGGAAAAGCCATGCATCATTTTAGAAGGAGAGGGTAGCCCGAACACAATCATAAGTTTTTGGGACCACCAAGGAATAAGTAATAACGCTACATTCACTTCATCGCCATCCAATGTGGTTGTGAGTGGCATTACTTTTAAGGTGAAAACCGAACCAATTGAACCAGCAGTGGCAGTAAGAATATACGGAGACAAATCTTTCTTCTTTAAGTGTAATTTTATAGGTTATCAAGACACTTTATTAGATGCAAGGGGACGCCATTACTTTAAAGATTGCTACATTCAAGGTGAAGTGGACTTTATTTTTGGTGCTGCACAATCTTACTATGAGAATTGTGTGATTAACGCTGTAGGGAGATATAAATCTTTACCAGGTTTTGTCACTGCTCAAGGACGAAATTCATCAGATGACCCAGGTGGTTTTGTATTTAAAGGGGGTTTCCTTACAGGGAATTTTATGGTGAATTTAGGAAGAGCATGGCGTGCTTACTCTAGAGTTATATTTCATGGAACATATTTTTCTTCCATTGTAACTCCTCAAGGATGGAATGCTTGGAATTACGTTGGTCAAGAGAGTAAGTTCACTTATGCTGAAGTTGATTGTAAAGGACCAGGAGCTGATACTTCAAAGCGTGTTACGTGGACGAAGAAACTAAATAGTTCACAGCTAGAAGAATTTTCTTTAGAATCTTTTATCAATAAAGATAAATGGCTTGACAACTTACCAACTATCTCCTAG 981 0.3751 MELFHKPMTFLLILLVTCFFCLGNAIDCGGKNVTYTIIVGRYGKVAFRTIQEAIDSVKSNNDRWVKIHINAGLYIERISIPLEKPCIILEGEGSPNTIISFWDHQGISNNATFTSSPSNVVVSGITFKVKTEPIEPAVAVRIYGDKSFFFKCNFIGYQDTLLDARGRHYFKDCYIQGEVDFIFGAAQSYYENCVINAVGRYKSLPGFVTAQGRNSSDDPGGFVFKGGFLTGNFMVNLGRAWRAYSRVIFHGTYFSSIVTPQGWNAWNYVGQESKFTYAEVDCKGPGADTSKRVTWTKKLNSSQLEEFSLESFINKDKWLDNLPTIS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01853 326 Gene3D - 30 324 IPR012334 -
Pumo9g01853 326 SUPERFAMILY Pectin lyase-like 34 322 IPR011050 -
Pumo9g01853 326 Pfam Pectinesterase 37 315 IPR000070 GO:0030599|GO:0042545
Pumo9g01853 326 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 30 320 - -
Pumo9g01853 326 FunFam Pectinesterase 31 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01853 Pumo-Chr9 47683713 47686293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01853 32 319 Carbohydrate Esterase AT1G05310 42.295 2.90e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01853 - - var:108336510 454.136