Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01850 ATGGAGATGCTTCTTCAACCAGTGCTTTTTCCTCTTGTATTGTTTCTTTGCTGCTCTTCCTGGGTTGGAGGAGCCATGGATTGTGGGGGGAACGAAATCGTAGATACCATAGTAGTTGATCAACAAGGCAAAGGAGAATTCAAAACGGTTCAAGCTGCCCTTGATTCGATAAAGGAAAACAATGATCGATGGGTCAAAGTTCACATAAATGCTGGCACGTACAAGATTGATTATAGGAGTACTGTGCCGGCAAAGAAGGTCACGACCATTACATCAAGTGGCTACCACAGCACTTCAAGTTCAAGTGATGACAACAACCACAAAAGTGATAACACGGGTGCTACATTCGTTTCTTTTCCACCCAATGTTTTTGTTATTGGCATTACCTTCGAGAACTCGTTTAATCTGGTGGGATCACAATTCATCGCACCTGCACCGGCGGCAGCCATATACGGTGACAAATGTGTGTTCTTTAAGTGTGGTTTCGTAAGTTATCAAGATACTTTGTTTGATTCAAGAGGACGTCACTATTTCAAAGATTGCTACATTGGAGGTGAAGTGGACTTCATTTATGGAAGTGGCCAATCTTATTATGAGGCTTGCACCATTAATGCTACGCAGGAAAGACCTTTTCCAGGTTATGTAACAGCCCAATCCCGAGATTCAGAAAATGACACAAGTGGTTTTCTATTTAGAACAGGTTGTGTAATTGGAATTGGTGGAGTTAATCTTGGAAGAGCCTGGGGACCTTATTCAAGAGTTATATTCCACGGAACATACTTATCTCCAATAGTATCACCAGAAGGATGGAATGCTTGGGATTACACAGGCCAAGAGTCCAAGTTTACTTATGCCGAGGTTGATTGTACCGGACCAGGAGCAAATACTGCAAAACGCGTTCAATGGAAAAAGAACCTTACTAGTTCACAGTTAAATGAGTTTTCTTTATCATCTTTTATCAACCAAGATGGGTGGCTTTCCAACTTACCAATGAGCATTTAG 1002 0.4172 MEMLLQPVLFPLVLFLCCSSWVGGAMDCGGNEIVDTIVVDQQGKGEFKTVQAALDSIKENNDRWVKVHINAGTYKIDYRSTVPAKKVTTITSSGYHSTSSSSDDNNHKSDNTGATFVSFPPNVFVIGITFENSFNLVGSQFIAPAPAAAIYGDKCVFFKCGFVSYQDTLFDSRGRHYFKDCYIGGEVDFIYGSGQSYYEACTINATQERPFPGYVTAQSRDSENDTSGFLFRTGCVIGIGGVNLGRAWGPYSRVIFHGTYLSPIVSPEGWNAWDYTGQESKFTYAEVDCTGPGANTAKRVQWKKNLTSSQLNEFSLSSFINQDGWLSNLPMSI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01850 333 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 35 327 - -
Pumo9g01850 333 SUPERFAMILY Pectin lyase-like 36 329 IPR011050 -
Pumo9g01850 333 Gene3D - 30 332 IPR012334 -
Pumo9g01850 333 FunFam Pectinesterase 31 330 - -
Pumo9g01850 333 Pfam Pectinesterase 37 322 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01850 Pumo-Chr9 47626261 47628508 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01850 10 279 Carbohydrate Esterase AT2G19150 39.130 1.61e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01850 - - gmx:100803932 535.798