Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01841 ATGGAGGAGGCCGTTCCCGATCCCCAACCGGAGGTGGAGGTGGAGGTGGAGGTGGAGCAGCCTCCGCCGCTTCAGAATGGGGACTCCGACGAGCACTGCGCCAAGAAGCCCAAAGTCGACGAAGCCGCCGAATTGAAGAGAGTGGCGGAGATTGTGCTGGTTCTCTCCACCATGGCCACGGTGCGCGCGGGGAGGAAACCCTCCGACGCCGAGGTTGAGCTCATGAGGGAGGCTCGCGCCAAGCTCGCGAATCTCTGCGAGGGTTTGGCTCCGAAGGATATTGTCGCCAGGGAAGCTATTGGCACTGTCATTGAGGATCTCGGATTGCACTCCAAGCTCAAGGACCAGAGATTAGGGTTTCGAACTCCCAAGATGTCCATTGCCGAGAGGTATTCCCATGCCAAGTGGAAGATGGAAGAAGCAAAGAAATTTTCTGCACCTTCTACAACACATACATCTCAGCCCTTGCAAACAAACATTGGTGGACCAGTTGATAATCGTGTGCAATCACATGTTCGAATTTTTCCTTCTGATAAATCAAGCCACCCAACAATCCCTTCTATGGGTCCCGTAGTGTCTATTCCTGCCCATGTTTCTGCAGGATCTTCTGCAGCATTGCAATATCAAGTGACCAGCAATGAAGTAAGACCACCAGTGGTTTCTGGTGTGATGCCTAGCAGTCACTTGGGGAGAAATTCATCTTCCTTAGTGATGCCTAAAGTTGAACACCCGCAGTTCAAAGTTGATGGAGGATCAAATGGGTCTTATATGCTGCAAGTACAAGCAAATTCATCAGCAAACCAACCTTTGGTAAATGCTCCAACGTGGTCTATACAGACTCAAGCTGCTTCATTAGCTAGAAGTGCATCAGAAAACAAGGTGCCTGTTCATAACTCTGTCAAGGTTGAAGGAACACCTGATGTAACTGTATCAAGGGCAGGGCCACAAATAACAACAGACCAGAGCTTTAGACCATTTATCACTCAAACAGCCCCTGGAAATTTGCCTAGTGTGCACCAGCCATTGCAGGCCACAAATATTGTTCAGCCTCCTTTGATTCCTAGTCACGCTGATATTGCAAAGATTGTCCAGAAAGTGTTACAACCAAAGCTTCCTGACCATCCCACGTGGACTCCTCCATCAAGGGATTATATGAATAAGGCTTTGACATGTCAGATGTGTGAGCTCAGTGTCAATGAGGTTGATACTGTACTTCTCTGTGATGCTTGTGAAAAGGGATTTCACTTGAAGTGCCTGCAGCCATCAGTCTTGAGAGGAATTCATAATAGAGTTGATTGGCACTGTATGAGGTGCTTGAGTTTAAGTGGTGGAAAGCCTTTGCCACCAAAATATGGTCGCGTCATGAGATCCTCAAACACACCTCCAAAATTGCCCTCTAATACAGGTGGTATTCAACCATGTTCTGAGAAGAAAGCAGAGAACATAGATCCAAAGGTCATCCCACTGACATTAACAACAAATGGGAGCTCTGTTCCAACTGTTTCCAGTGGCAATCACAATGTTGAGCTGCCATCTGACTCAAAGATCCCAGATACCAAAGATATACAAGGGATGGACAATTCATCCAGGATTGAAGCTATTGATAAGAAGCCTGATCCAAACAACTCTATGAAATCTCTTAGTGCAGCTTCTAGTCCTTCCCCTGGCTTGCTAGATAAATACGTTGACAGTAATATTATGAATAATAAACAGAAGGAATCTCATGGAGGAGAAAATTTAACTTACGATATCAAGCGTGATGACCAAGATGCTGCAGTTGCAAATTTTGTTGGAACTTCTGGAACTAATACTGAAGGTAGACAGCACTCAGCATTATCTTCAGATAGTTCACATGCTGTAGAATGGATTGGTGATGTAGTACAACTTGTAGATGAGAAAAAGTTTTACCAGTCTTGCTGTGTTGATGGAGTAACATATAGGCTGCAGGGTCATGCTCTTTTCCCCAATGGCCATGGGAAACTAACTCCTTCTAAACTCCAGTCTATGTGGGAAGATTGCAAAACTGGGTTAAAGTGGGTTAAGGTGACAAGGTGCTACTTTCCTGATGATTTGCCAGGGAATATTGGTCATCCGTGTATATCTGAAGTCAATGAGGTTTATGAATCTAATAGTGATAGAACTGAAATGGCTAGCTCTATTCGAGGCCCATGTGAAGTCCTCCCATCTGATAAATTTAGACAAGAAAATGACAGGCGATGTCACTTAGGAATTGAGGAAAGTTCTAGAGTGCAGCCCATTTTCCTTTGCAGGTATTTGGTAGGGTTTCGAACAGGAATTTTCTTGTATGGGTAA 2313 0.4531 MEEAVPDPQPEVEVEVEVEQPPPLQNGDSDEHCAKKPKVDEAAELKRVAEIVLVLSTMATVRAGRKPSDAEVELMREARAKLANLCEGLAPKDIVAREAIGTVIEDLGLHSKLKDQRLGFRTPKMSIAERYSHAKWKMEEAKKFSAPSTTHTSQPLQTNIGGPVDNRVQSHVRIFPSDKSSHPTIPSMGPVVSIPAHVSAGSSAALQYQVTSNEVRPPVVSGVMPSSHLGRNSSSLVMPKVEHPQFKVDGGSNGSYMLQVQANSSANQPLVNAPTWSIQTQAASLARSASENKVPVHNSVKVEGTPDVTVSRAGPQITTDQSFRPFITQTAPGNLPSVHQPLQATNIVQPPLIPSHADIAKIVQKVLQPKLPDHPTWTPPSRDYMNKALTCQMCELSVNEVDTVLLCDACEKGFHLKCLQPSVLRGIHNRVDWHCMRCLSLSGGKPLPPKYGRVMRSSNTPPKLPSNTGGIQPCSEKKAENIDPKVIPLTLTTNGSSVPTVSSGNHNVELPSDSKIPDTKDIQGMDNSSRIEAIDKKPDPNNSMKSLSAASSPSPGLLDKYVDSNIMNNKQKESHGGENLTYDIKRDDQDAAVANFVGTSGTNTEGRQHSALSSDSSHAVEWIGDVVQLVDEKKFYQSCCVDGVTYRLQGHALFPNGHGKLTPSKLQSMWEDCKTGLKWVKVTRCYFPDDLPGNIGHPCISEVNEVYESNSDRTEMASSIRGPCEVLPSDKFRQENDRRCHLGIEESSRVQPIFLCRYLVGFRTGIFLYG 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01841 770 SMART PHD_3 390 439 IPR001965 -
Pumo9g01841 770 Gene3D - 623 767 IPR043151 -
Pumo9g01841 770 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 380 452 IPR013083 -
Pumo9g01841 770 MobiDBLite consensus disorder prediction 493 560 - -
Pumo9g01841 770 ProSitePatterns Zinc finger PHD-type signature. 391 438 IPR019786 -
Pumo9g01841 770 ProSiteProfiles Zinc finger PHD-type profile. 388 441 IPR019787 -
Pumo9g01841 770 MobiDBLite consensus disorder prediction 145 164 - -
Pumo9g01841 770 Pfam PHD-finger 391 439 IPR019787 -
Pumo9g01841 770 ProSiteProfiles BAH domain profile. 644 770 IPR001025 GO:0003682
Pumo9g01841 770 CDD BAH 643 759 - -
Pumo9g01841 770 MobiDBLite consensus disorder prediction 456 479 - -
Pumo9g01841 770 MobiDBLite consensus disorder prediction 459 474 - -
Pumo9g01841 770 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 572 - -
Pumo9g01841 770 MobiDBLite consensus disorder prediction 1 33 - -
Pumo9g01841 770 MobiDBLite consensus disorder prediction 493 512 - -
Pumo9g01841 770 SUPERFAMILY FYVE/PHD zinc finger 381 446 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01841 Pumo-Chr9 47556785 47562600 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pumo9g01841 PHD 1.7e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01841 - - gmx:100807139 1313.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01841 9 47556785 47562600 Pumo9g01841 9 47556785 47562600 ECH