Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01839 ATGGCGTCTTCTTCAGACTCGTGGGTGAAGGAATATAATGAAGCGCTTAAACTTGCTGATGATATCAGTGGTATGATTTCTGAGCAGAGTTCATTTCCTGCATCTGGACCGGAAACCCAGCGTCATTCATCTGCTATAAGAAGGAAGATTACAATATTGGGGACCAGGCTTGATAGCTTGCAATCCCTTTTGTCCAAGCTTCCCGGAAAGCAGTCCATATCTGAGAAGGAGATGAATCGTCGCAAGGACATGCTTGCAAATTTGAGATCAAAAGTTAATCAAATGGCTTCCACATTGAACATGTCAAACTTTGCTAGTAGGGATAGTTTGCTTGGGCCGGAAAGAAAACCAGATGCAATGACCAGGACTGTTGGCCTGGACAACAATGGACTTGTTGGACTTCAACGGCAAATTATGAAAGAACAAGACGATGGCCTTGAGCAATTGGAAGAGACTATAGCAAGTACAAAACATATTGCATTGGCAGTGAATGAAGAGCTGGATCTACACACTAGACTCATTGATGACTTGGACCAACATGTAGATGTTACAGATTCTCGGCTTAGGCTTATTTTTTACGTTTCTGTTGTGAAAACAGCGGGTGCAGAAGAACTTGGCAGTTTTAAATAA 630 0.4238 MASSSDSWVKEYNEALKLADDISGMISEQSSFPASGPETQRHSSAIRRKITILGTRLDSLQSLLSKLPGKQSISEKEMNRRKDMLANLRSKVNQMASTLNMSNFASRDSLLGPERKPDAMTRTVGLDNNGLVGLQRQIMKEQDDGLEQLEETIASTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRLIFYVSVVKTAGAEELGSFK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01839 209 SUPERFAMILY t-snare proteins 20 100 IPR010989 GO:0016020|GO:0016192
Pumo9g01839 209 SUPERFAMILY SNARE fusion complex 127 190 - -
Pumo9g01839 209 CDD SNARE_Qc 139 189 - -
Pumo9g01839 209 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 136 189 IPR000727 -
Pumo9g01839 209 Coils Coil 146 166 - -
Pumo9g01839 209 FunFam syntaxin-51 isoform X2 138 195 - -
Pumo9g01839 209 Gene3D - 138 191 - -
Pumo9g01839 209 PANTHER SYNTAXIN 38 187 IPR045242 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01839 1 191 SNARE and Associated Proteins AT1G16240 72.396 1.32e-98 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01839 K08503 - gmx:100782666 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01839 9 47518255 47521001 Pumo9g01839 9 47518255 47521001 ECH