Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01829 ATGCCGGACCAAGATATTTGCAGCTACCTTAATGAACCTCGTCTTGTAGCCAGAAAGTTCTTGGCCAGACCTCAGCATGAGGGTGTTGGAGCAGTTGTTAGAAGAAGCATAGGGAGATTTGAGCTCAAGTACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTCACTGCTCCTGCTGGGTTTCCTGATCATCCACATAGAGGATTTGAGACGGTCACATACATGTTGCAGGGAGCTGTAACCCATGAAGATTTTGAAGGACATAAGGGAACAATTGAAGCTGGTGACTTGCAATGGATGACTGCAGGGAGAGGGATACTTCACTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGTCTCCAGCTGTGGATCAATCTTGCTTCAAAACATAAAATGATTGAGCCAAGGTACCAAGAAATGTTGAGCAAGGACATAGCTGAAACTATGGTAGATGGTATCAAAGTTAGAGTTATAGCAGGGGAAGCTCTTGGAATAAAGTCTCCAATCTACACAAGGACACCAACCATGTACTTGGACTTTTCTCTTAAACCTGGTGCTCACTTGCAACAACTTATACCAAAATCTTGGAATGCTTTTGTGTACATATTGGAAGGAGAGGGTGTTTTTGGAAACCAAAAGTCTCAACCTGTGACCTCTCACCATATACTTCTTCTTGGTTCTGGGGATGGTCTAGAGGCATGGAACAAATCTTCTAAGGTCCTTAGGTTCATTTTGGTTGGAGGTGAACCATTGGGTGAACCTGTGGTGCAATTTGGACCCTTTGTGATGAATACTCAAGAAGAGATTGACCAGACAATTGATGATTTTGAGAACTATACCAACGGATTTGAGAAAGCAAGACATTGGAGGTCTGAAAGTGCAATTGCCTTGACTATTGATTTTATTTAA 915 0.4273 MPDQDICSYLNEPRLVARKFLARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGILHSEMPAAQGTQKGLQLWINLASKHKMIEPRYQEMLSKDIAETMVDGIKVRVIAGEALGIKSPIYTRTPTMYLDFSLKPGAHLQQLIPKSWNAFVYILEGEGVFGNQKSQPVTSHHILLLGSGDGLEAWNKSSKVLRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENYTNGFEKARHWRSESAIALTIDFI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01829 304 PIRSF Pirin 12 292 IPR012093 -
Pumo9g01829 304 Pfam Pirin 33 126 IPR003829 -
Pumo9g01829 304 CDD cupin_pirin_C 176 252 - -
Pumo9g01829 304 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Pumo9g01829 304 Gene3D Jelly Rolls 148 253 IPR014710 -
Pumo9g01829 304 CDD cupin_pirin_N 31 128 - -
Pumo9g01829 304 Gene3D Jelly Rolls 27 279 IPR014710 -
Pumo9g01829 304 FunFam pirin 27 166 - -
Pumo9g01829 304 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Pumo9g01829 304 PANTHER PIRIN-RELATED 10 295 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01829 Pumo-Chr9 47378826 47382186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01829 13 289 Calmodulin-binding Proteins AT3G59220 59.140 2.21e-125 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01829 K06911 - gmx:100811930 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01829 9 47378826 47382186 Pumo9g01829 9 47378826 47382186 ECH
Pumo1g00844 1 12876866 12880316 Pumo9g01829 9 47378826 47382186 PCT