Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01814 ATGTCCTATGACTCTAGCAGGTTCAACATTGAGCCTGTGCAAAATATGGGGTCATGTTGCTTCCTGCAAAATGGGAACCTAGACTACTACTCATCCTCTGATAACAGTAGCCATGCAACCTACCCTTCTGTTTGTACTTTCGAACAATATTGCACCCTGGAATCTTCTACAAACAACAATTTCCCTTCCCTAAATTCCCCATCTACTGTCAGTTTCTCACCTAACAATAGCCCAGTCTCAAAGCCACAGTCAAAATCATACGTGTTGAGTTCACAGAATTCTCTTGAACTTGTTAACGATTCGCTAGAAAATGAATCTTGTTTGACACATAATGATGATGAGCTGAGGCACAAGATAAGAGAGCTTGAAAGTGCTATGTTGGGACATGATGCAGATATTCTGGATATATACAATACTGTAATTCCAGAAGAATCTGATTCATTTTTGTTAGAGGCAGAAAGGTGGAAGAGGATGATGGAAATGATATCTAGAGGGGATTTGAAAGAGATGCTTTGTACATGTGCAAAAGCTGTGGCAGCAAATGATATGGAGACAACTGAATGGTTGATGTCAGAGCTGCGTAAAATGGTCTCCATCTCGGGCAATCCACTCCAACGATTGGGAGCATACACGTTGGAGGCTCTTGTTGCAAGGCTGGCCTCTTCAGGAAGCACAATCTACAAAGCCTTGAAATGTAAAGAGCCTACTGGTAATGAACTCCTTTCACACATGCATCTACTTTATGAAATCTGCCCATATCTCAAATTTGGGTACATGTCAGCAAATGGAGCTATTGCTGAAGCCATGAAGGAGGAAAGTGAAGTCCACATAATTGATTTTCAGATTAACCAGGGAATTCAATGGGTAAGCCTGATCCAAGCTCTTGCTGGCAGACCTGGAGGACCCCCCAAGATCAGAATAACAGGTTTTGATGACTCCACTTCAGCTTATGCCAGGGGAGGGGGCCTTGAAATCGTTGGAGCAAGGTTATCAACACTTGCACAATCATGTAATGTACCCTTTGAGTTCCATGCTATACGAACTGCTTCCACTGAGGTTGAACTCAAAGACCTTACACTTCAACCTGGTGAAGCTATTGCTGTGAACTTTGCCATGATGCTGCACCATGTTCCAGACGAAAGTGTGGATAGTCGGAACCATCGTGACCAGTTGGTGAGATTGGCAAAGTGCTTGTCTCCTAAGATTGTGACACTAGTTGAGCAAGAATCACATACCAACAACCTCCCATTCTTCCCCCGTTTTGTTGAGACAATGAACTACTACTTGGCTATTTTTGAATCAATTGATGTTGCTCTGCCGAGGGAGCACAAAGAAAGGATTAATGTGGAGCAGCATTGTTTGGCTCGAGAAGTTGTCAACTTAATAGCATGTGAAGGGGCAGAAAGAGTGGAACGTCACGAGCTTCTGAAGAAGTGGAGATCACGTTTCACTATGGCTGGATTCACACCATATCCATTGAATCCCTTTATTACTTGTTCAATAAAAAATCTTCAACAAAGCTACCAAGGACATTACACTCTAGAAGAGAGAGATGGGGCTCTATGTCTTGGTTGGATGAATCAAGTTCTCATTACCTCTTGTGCTTGGAGCTGA 1614 0.4287 MSYDSSRFNIEPVQNMGSCCFLQNGNLDYYSSSDNSSHATYPSVCTFEQYCTLESSTNNNFPSLNSPSTVSFSPNNSPVSKPQSKSYVLSSQNSLELVNDSLENESCLTHNDDELRHKIRELESAMLGHDADILDIYNTVIPEESDSFLLEAERWKRMMEMISRGDLKEMLCTCAKAVAANDMETTEWLMSELRKMVSISGNPLQRLGAYTLEALVARLASSGSTIYKALKCKEPTGNELLSHMHLLYEICPYLKFGYMSANGAIAEAMKEESEVHIIDFQINQGIQWVSLIQALAGRPGGPPKIRITGFDDSTSAYARGGGLEIVGARLSTLAQSCNVPFEFHAIRTASTEVELKDLTLQPGEAIAVNFAMMLHHVPDESVDSRNHRDQLVRLAKCLSPKIVTLVEQESHTNNLPFFPRFVETMNYYLAIFESIDVALPREHKERINVEQHCLAREVVNLIACEGAERVERHELLKKWRSRFTMAGFTPYPLNPFITCSIKNLQQSYQGHYTLEERDGALCLGWMNQVLITSCAWS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01814 537 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 114 531 IPR005202 -
Pumo9g01814 537 MobiDBLite consensus disorder prediction 66 85 - -
Pumo9g01814 537 Pfam GRAS domain family 168 536 IPR005202 -
Pumo9g01814 537 ProSiteProfiles GRAS family profile. 158 537 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01814 Pumo-Chr9 47279172 47280785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01814 43 536 GRAS Transcription Factor Family AT1G50600 60.600 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo9g01814 GRAS 2.8e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01814 - - gmx:100817120 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01814 9 47279172 47280785 Pumo9g01814 9 47279172 47280785 ECH
Pumo1g00829 1 12597989 12599224 Pumo9g01814 9 47279172 47280785 PCT