Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01806 ATGCTAATAATCAACATAGTTTGGAGATCAAAAACCAATAAACCAAACTCCAAGTTGCCACCAGGACCAAGGAAGCTACCTCTCATAGGGAACATACACAACCTTGGAACTCTGCCTCATAGGTCCCTAGCAAGATTGGCAAGTCAATATGGTCCTCTCATGCATATGCAGCTGGGTGAGCTTTGCTGCATGGTGGTATCTTCGCCCGAAATGGCCAAAGAAGTGATGAACACACATGATATCATCTTTGCAAATAGGCCTTATGTGCTTGCTGCTGATGTTATCACTTATGGCTCTAAGGGCATGACCTTCAGCCCACATGGAAGTTATTGGAGGCAGATGAGAAAGATTTGTACCAAAGAAATGCTAGCACCAAAGCGTGTTGACTCCTTCAGATCAATCAGGGTAGAAGAGTTGTCAAATGTTGTCAAAGAGATATCTTTGAGTGAAGGGTCACCTATTAATCTCAGTGAGAAGATTAATTCATTGGCATATGGGCTAATATCACGGATTGCTTTTGGTAAAAAATCTAAAGACCAAGAGGCTTATATGGAACATATGAAGGGTGTCACTGAGACAGTATCAGGGTTCTCTCTTGCTGATCTGTATCCTTCCATTGGACTTCTTCAAGTTCTTACTGGGATTAGGACCAGAGTTGAGAATATCCGTCATGGAATGGATAGGATAATTGAGAACATTGTTAGGGATCACAGAGACAAAAATTTGGACACACAGACTATTGGTGAAGAAAATGGGGAAGATCTAGTTGATGTTCTTTTAAGGCTTCAGAAGAATGGTGACCTCCAACACCCCCTATCTGACACTGTTGTCAAAGCAACCATTATGGACATTTTCAGTGCTGGAAGTGAGACTTCTTCAACCATTATGGAGTGGGTAATGTCAGAACTGGTGAAAAACCCAAGGGTGATGGAGAAAGTGCAAATTGAGGTAAGAAGGGTCTTTGATGGAAAAGGACATGTGGATGAAACAAGTATTCATGAACTGAAATACTTGAGATCAGTTATCAAAGAAACTTTGCGTTTACATCCACCTGTTCCATTGCTGCTTCCAAGGGAATGCAGTGAGAGATGTGAGATTAATGGGTATGAGATACCAACCAAGAGCAAGGTCATTGTTAATGCTTGGGCAATTGGGAGGGATCCTAACTATTGGATTGAAGCTGAGAAATTTTATCCTGAAAGGTTCCTTGATAGCTCAATTGACTACAAAGGTGGTGAGTTTCAGTTTATCCCATTTGGAGCTGGAAGGAGGATATGCCCTGGCATCAACCTTGGCATGGTTAATGTTGAATTCTCACTTGCAAATTTGCTTTTCCATTTTGATTGGAAAATGGCTCAAGGGAATAGGCCTGAAGAACTTGATATGACTGAATCCTTTGGCTTGTCAGTAAAAAGAAAAAAGGATTTACAGTTGATTCCTATCACTTACCACTCAGTTACAAGTTAA 1467 0.4104 MLIINIVWRSKTNKPNSKLPPGPRKLPLIGNIHNLGTLPHRSLARLASQYGPLMHMQLGELCCMVVSSPEMAKEVMNTHDIIFANRPYVLAADVITYGSKGMTFSPHGSYWRQMRKICTKEMLAPKRVDSFRSIRVEELSNVVKEISLSEGSPINLSEKINSLAYGLISRIAFGKKSKDQEAYMEHMKGVTETVSGFSLADLYPSIGLLQVLTGIRTRVENIRHGMDRIIENIVRDHRDKNLDTQTIGEENGEDLVDVLLRLQKNGDLQHPLSDTVVKATIMDIFSAGSETSSTIMEWVMSELVKNPRVMEKVQIEVRRVFDGKGHVDETSIHELKYLRSVIKETLRLHPPVPLLLPRECSERCEINGYEIPTKSKVIVNAWAIGRDPNYWIEAEKFYPERFLDSSIDYKGGEFQFIPFGAGRRICPGINLGMVNVEFSLANLLFHFDWKMAQGNRPEELDMTESFGLSVKRKKDLQLIPITYHSVTS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01806 488 PANTHER OS08G0105600 PROTEIN 43 484 - -
Pumo9g01806 488 PRINTS E-class P450 group I signature 163 181 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 PRINTS E-class P450 group I signature 47 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 PRINTS E-class P450 group I signature 339 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 PRINTS E-class P450 group I signature 71 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 Gene3D Cytochrome P450 12 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 FunFam Cytochrome P450 71D8 12 480 - -
Pumo9g01806 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Pumo9g01806 488 Pfam Cytochrome P450 20 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 CDD CYP71-like 49 476 - -
Pumo9g01806 488 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g01806 488 SUPERFAMILY Cytochrome P450 20 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01806 Pumo-Chr9 47182493 47184491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01806 12 481 Cytochrome P450 AT5G25120 42.083 1.94e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01806 - - gmx:100819247 869.766