Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01801 ATGGCCAAGATGGGGTTATTATCAGCTTTGGTTTTTTGGGTTTTGTTGTTGAAGTGTGTTCAGGTGCATGGTGATACCGATAGTGATCATGCTAGAAACTTCATTACGTGGGAAGACTTCATGGTGGATGAACAAGGTATAACATCCAATGTTGGTGGTCGAGTTATTGTGGTCGATCAAACTGGTAACGGAGATTCAACAACTGTTCAAGGGGCTGTAGATATGGTTCCCCAAAACAACACAGAAAGGGTCAAGATATACATTTATCCTGGAATTTATAGAGAAAAAGTGCGTGTGCCTGTGACCAAGCCTTATGTATCATTTATAGGGAAAAGAAATCAAACAGCAAGTCCTGTTATTACTTGGCACAGTAAGTCATCTGACAAAGGCCCAAATGGCACAGCATTGGGCACGTATGATTCAGCAACAGTGGGAGTGGACTCAGATTATTTCTGTGCAACTGGGGTCACTTTCGAGAACTCAGTGATTGCATCGGCTGGTGGAAAAGGGATGCAAGGAGTGGCACTGAGGGTAAACAGTGCAAGAGCCATGTTCTATCGAGTGAGGATCAAGGGAACACAGGACACTCTCTTGGACAACACAGGAAGTCATTATTTCTTAAAGTGTCGCATCCTTGGAAAAGTTGATTTTATCTGTGGCAGCGCAAAATCACTCTATGAGAAGTGTCGTCTTCAGTCAATAGCTGAGAACTATGGAGCAATAGCAGCACATCATAGGAATTCACCAACTGAAGACACAGGTTTTTCATTTGTAGGGTGCAGTATTAGAGGAACTGGCAGTGTGTACCTTGGCAGAGCATGGGGGAACTACTCAAGAATTATATACTCCAAATGTAATATGGATGGCATTATTAATCCTGAAGGGTGGTCAGACTGGAATCATTCAAATAGAAAGAAGACTGCAGTATTTGCTGAGTATCAATGCAAGGGAAGGGGAGCAGATAGAAGACATAGGGTGCCTTGGTCAAAATCATTCAGCTATCAGGAAGCAAGGCCTTTCCTTTACAAGAGCTTCATAGATGGAGACCAATGGCTCAGACTGTAG 1065 0.431 MAKMGLLSALVFWVLLLKCVQVHGDTDSDHARNFITWEDFMVDEQGITSNVGGRVIVVDQTGNGDSTTVQGAVDMVPQNNTERVKIYIYPGIYREKVRVPVTKPYVSFIGKRNQTASPVITWHSKSSDKGPNGTALGTYDSATVGVDSDYFCATGVTFENSVIASAGGKGMQGVALRVNSARAMFYRVRIKGTQDTLLDNTGSHYFLKCRILGKVDFICGSAKSLYEKCRLQSIAENYGAIAAHHRNSPTEDTGFSFVGCSIRGTGSVYLGRAWGNYSRIIYSKCNMDGIINPEGWSDWNHSNRKKTAVFAEYQCKGRGADRRHRVPWSKSFSYQEARPFLYKSFIDGDQWLRL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01801 354 Gene3D - 52 354 IPR012334 -
Pumo9g01801 354 Pfam Pectinesterase 56 349 IPR000070 GO:0030599|GO:0042545
Pumo9g01801 354 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 46 353 - -
Pumo9g01801 354 FunFam Pectinesterase 52 354 - -
Pumo9g01801 354 SUPERFAMILY Pectin lyase-like 53 352 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01801 Pumo-Chr9 47145309 47154189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01801 10 306 Carbohydrate Esterase AT5G55590 54.375 2.19e-119 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01801 K01051 - gmx:100804220 588.186