Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01797 ATGGCCAACAATGGTGTAAAGGAGCCATTGCTGTCAGGATCACTGGATGCGACTCAAAAGGCTAAACAGCAGTTAAACAAGAGAAGGCTCCTCCGTTCTAGAAGTGCTCCTCACGCAGAGCTTGTTCCTACGGAGACAAATGGCAATGAATCAATTCCCCGTACTGCATCCATATTTCAGAATTTACATCCAAGCTTTAAAAGAGTGGCTATCTACCTTGCAGTCTATTTAGGTGTAGGTGCTTTAATCTTCTACCTTGTCAGGAACCAGATTAAGGGGATGAAAACAGATGGAATTCTTGATGCTTTATACTTTACAATTGTGACAATGACCACTGTTGGATATGGAGATCTTGTTCCCAATAGCCACCTTACAAAACTACTTGCATGTGCTTTTGTTTTCTCTGGGATGGCATTGATTGGACTAATTGTAAGCAAAGCAGCAGACTACTTAGTTGAGAAACAGGAACTTTTGCTAGTTAAAGCTATGCGCATGCACCAAAAAGTTGGTTCGACTGAAATTTTAAGGGAGGTTGAGACCAATAAAACAAGATACAAATTGTTTCTAGTCTTTTTCCTTCTTTTGATTCTCATCATTGGGGGGACAATTTTTTTGGTCACAGTTGAGAAATTGGATGTTATTGATGCATTCTACTGTGTTTGTTCTACAATTACAACCCTGGGTTATGGGGATCAAAGTTTCTCAACTCAAGCAGGAAGACTATTTGCAGTGTTTTGGATATTGACAGGTACTATTACTTTAGCTCAGCTTTTCCTCTACATTGCTGAGCTAAACACTGAAATCAGACAAAAGGAAATTGTCAAGTGGGTGCTTACAAGGAAAATGACCAATTTAGATTTGGAGGCTGCAGATCTTGATGAGGATGGGACTGTTGGGGCTGCGGAATTCGTTATTTATAAGCTCAAAGAGATGGGGAAGATTAGTCAAGAAGATATATCACTTGTGATGCGGGAGTTTGAACAGCTTGATGTTGATGATTCTGGCACACTTTCAAATTCGGATATAACACTTGCTCAGTCATCTTAG 1047 0.3992 MANNGVKEPLLSGSLDATQKAKQQLNKRRLLRSRSAPHAELVPTETNGNESIPRTASIFQNLHPSFKRVAIYLAVYLGVGALIFYLVRNQIKGMKTDGILDALYFTIVTMTTVGYGDLVPNSHLTKLLACAFVFSGMALIGLIVSKAADYLVEKQELLLVKAMRMHQKVGSTEILREVETNKTRYKLFLVFFLLLILIIGGTIFLVTVEKLDVIDAFYCVCSTITTLGYGDQSFSTQAGRLFAVFWILTGTITLAQLFLYIAELNTEIRQKEIVKWVLTRKMTNLDLEAADLDEDGTVGAAEFVIYKLKEMGKISQEDISLVMREFEQLDVDDSGTLSNSDITLAQSS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01797 348 PRINTS Two pore domain K+ channel signature 296 305 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pumo9g01797 348 PRINTS Two pore domain K+ channel signature 222 250 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pumo9g01797 348 Gene3D - 166 279 - -
Pumo9g01797 348 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 69 320 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pumo9g01797 348 FunFam Calcium-activated outward-rectifying potassium channel 1 63 158 - -
Pumo9g01797 348 SUPERFAMILY Voltage-gated potassium channels 64 167 - -
Pumo9g01797 348 FunFam Two-pore potassium channel 1 167 275 - -
Pumo9g01797 348 Pfam Ion channel 193 264 IPR013099 -
Pumo9g01797 348 Pfam Ion channel 72 152 IPR013099 -
Pumo9g01797 348 SUPERFAMILY EF-hand 250 344 IPR011992 -
Pumo9g01797 348 Gene3D - 63 157 - -
Pumo9g01797 348 SUPERFAMILY Voltage-gated potassium channels 158 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01797 Pumo-Chr9 47109612 47112424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01797 53 348 Ion Channels AT5G55630 66.554 3.36e-149 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01797 K05389 - gmx:100777388 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01797 9 47109612 47112424 Pumo9g01797 9 47109612 47112424 ECH