Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01786 ATGGGCAAGTGCATGGGCATGGCTTTCACTTTCTTCTTCATCTTCACGTTGTTCTTGTGGGAGGTGACAGTAGCAGTAGCAGTAGCAGACAACGTGAGCTTCGTCTTCCCCTCTTTCCCTCTCAACACCAACAACAGCATCACCCTCCTCGGCGATTCCTCTCTAAGGAAAAACGGCGTCGTTCTACTCACCAACGCCGCCCCCACTTCCAGCACCGGCGCCGTCCTCTACACCCATCCCATCTCCCTCTTCGACCCTCAAACCGCCACCTTCGCCTCCTTCTCCACCGCCTTCTCCTTCTCCATCAACAACCTCAACCCCACCTCCTCCGGCGACGGCCTCGCCTTCTTCCTCTCCCCCAACAACAACACCCTCTTCGGGCCCCTCGGCCTCCCCACCACCACCACCTTCGTCGCCGTCGAGTTCGACACGCGCCTCGATGCGCGCTTCGACGACCCCAACGAGAACCACGTGGGCTTCGACGTGGACGCCATGAAGTCCCTCAAAACCGGAGACCCCATCTTGCACGGCATCGACCTCAAGAGCGGCAACACCATCGCTGCATGGATTGACTACAACACCGACCGCACATTGCTCAACGTTTTCTTGAGCTATTCACGCACTTCGAAACCCGTCGAACCCGTCCTCTCTGTGAGGTTCGATCTTTCTCAACACTTGAGAGACCCCGTCTACGTTGGCTTCTCCGCTTCCACTCAGGGAAGCACCGAGCTTCACCAAATCCAAAGTTGGAGCTTTCACAGCACTGCCTTTGTTCCCGAAAGAACCAGGTTGCACCCTCACAACGTTTCCGTGGTGGGAACTACTGTTCCCACTTCACGTTCGGGTTCTGCTTCCACCAAGAAGCGTGACAGGAGCGTTGGCATTGGTGTGGCTGTTGCGGGTTCTGTTTCTTTCTTTGTGGCGTTTTCAATCTTGGGGTATGTTTTTGTTCGGAGATGGAGGGGTGGTGGCAGAAAAGAGAAAGACAAGTTTCAGAGTGGTTTCGTGGCGTGTCCTAGGGCGTTTGATTACAAAGAGTTGAAGTCTGCTACAAGAGAGTTTCACCCGAGTAGGATTGTTGGGCATGGATCGTTTGGGACGGTGTATAAGGCTTTCTTTATATCTTCTGGAACCATTGCTGCTGTGAAAAGGTCAAGACATTCTCACGAAGGGAAGACTGAGTTTCTGGCTGAACTCTCCACCATAGCTGGTTTGAGGCACAGGAATTTGGTTCAGCTTCAAGGTTGGTGTGTTGAGAAGGGGGAGTTGCTGCTTGTGTATGATTTTATGCCTAATGGAAGCTTGGACAAGATGCTTTACAAGGAACCTGAAAGGGGGAGGCTGTTGAGTTGGTCTCACAGGCAAAACATTGCTCTAGGCTTGGCTTCTGTGCTGGTTTACCTTCACCAAGAATGTGAGCAGAGAGTGATTCATAGGGACATTAAGGCTGGGAACATATTGCTGGATGGGAACTTCAACCCTAGGTTAGGGGATTTTGGATTGGCAAAGCTTATGGATCATGATAAGAGCCCTGTGTCCACTTTAACTGCTGGAACAATGGGGTACCTTGCACCTGAGTATCTTCAGTATGGAAAAGCCACTGATAAGACTGATGTTTTCAGCTATGGGGTGGTTGTGCTTGAAGTGGCTTGTGGGAAGAGGCCAATTGAAAGAGAGGGGTCAAAGATGGTGAATCTGATTGATTGGGTTTGGGGGCTTCACTCTGAAGGGAAAGTGATTGAGGCAGCTGACAAGAGGTTGAATGGGGAGTTTGAGGAGGAGGAAATGAGGAAGCTCTTGCTCTTGGGGTTGAGCTGTGCTAATCCTGATAGTGCTGAGAGACCCTCCATGAGAAGAGTGCTGCAGATTCTCAACAATGAGGCTGCACCACTTGTTGTGCCAAAAGTGAAGCCAATACTCACTTTTTCTTCTGACCTGCCTCTCACTATTGAGGACATTGTTTCCGATTCTGAAGAGTTCAGTACAAGCCAGTCTATGTGCGAGATCAAAATTGACTGA 2019 0.5111 MGKCMGMAFTFFFIFTLFLWEVTVAVAVADNVSFVFPSFPLNTNNSITLLGDSSLRKNGVVLLTNAAPTSSTGAVLYTHPISLFDPQTATFASFSTAFSFSINNLNPTSSGDGLAFFLSPNNNTLFGPLGLPTTTTFVAVEFDTRLDARFDDPNENHVGFDVDAMKSLKTGDPILHGIDLKSGNTIAAWIDYNTDRTLLNVFLSYSRTSKPVEPVLSVRFDLSQHLRDPVYVGFSASTQGSTELHQIQSWSFHSTAFVPERTRLHPHNVSVVGTTVPTSRSGSASTKKRDRSVGIGVAVAGSVSFFVAFSILGYVFVRRWRGGGRKEKDKFQSGFVACPRAFDYKELKSATREFHPSRIVGHGSFGTVYKAFFISSGTIAAVKRSRHSHEGKTEFLAELSTIAGLRHRNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGRLLSWSHRQNIALGLASVLVYLHQECEQRVIHRDIKAGNILLDGNFNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSYGVVVLEVACGKRPIEREGSKMVNLIDWVWGLHSEGKVIEAADKRLNGEFEEEEMRKLLLLGLSCANPDSAERPSMRRVLQILNNEAAPLVVPKVKPILTFSSDLPLTIEDIVSDSEEFSTSQSMCEIKID 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01786 672 CDD lectin_legume_LecRK_Arcelin_ConA 32 255 IPR001220 GO:0030246
Pumo9g01786 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Pumo9g01786 672 Gene3D Phosphorylase Kinase; domain 1 320 429 - -
Pumo9g01786 672 ProSitePatterns Legume lectins beta-chain signature. 138 144 IPR019825 -
Pumo9g01786 672 Gene3D Transferase(Phosphotransferase) domain 1 430 632 - -
Pumo9g01786 672 FunFam L-type lectin-domain containing receptor kinase VIII.1 430 642 - -
Pumo9g01786 672 CDD STKc_IRAK 360 626 - -
Pumo9g01786 672 Pfam Protein kinase domain 355 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01786 672 Gene3D - 29 272 - -
Pumo9g01786 672 PANTHER - 53 634 - -
Pumo9g01786 672 Pfam Legume lectin domain 32 259 IPR001220 GO:0030246
Pumo9g01786 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 260 IPR013320 -
Pumo9g01786 672 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Pumo9g01786 672 ProSiteProfiles Protein kinase domain profile. 354 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01786 672 SMART serkin_6 354 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01786 672 SUPERFAMILY Protein kinase-like (PK-like) 337 650 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01786 Pumo-Chr9 47052793 47054811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01786 7 659 Receptor kinase-like Gene Family AT5G55830 57.562 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo9g01786 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01786 - - gmx:102668712 1055.82