Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01772 ATGGAGAAGGAAAGAGAAGATGAGATTGAGGACATGTCAATGTCACCTCCATCTATTGGCTCCATGCAAATTGCAGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATACCTTCCAAATATGTACACAGAGATTGACATAAAAGTTGAGGATTCCAGTTTCAACCAAGATCCCCCCCTCCCCATTTATCTCAAGTTTGAAGATGTAGAGTTCAAGGTGAGAGATAGCCAAGCGGCTTCCAATAACCCTGTGATGACAATGATGTCAAAGGTAGCCACACAACACCACGTGGAGGAAGATAGGTACAAGAAAATTTTGAAGAGTATCACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGCAGTGGGAAAACAACCTTGTTGAGAGTTGTAGGGGGAAGATTAATTGACAATGTAAAGGGGAAGATAACTTATAATGATGTTCGATTTAATCCAGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTCCCACAACTTACAGTAGAGGAAACATTAATCTTCTCTGCATTCTTAAGGCTGCCAAGCAATATGAGCAAGCAACAAAAATATGCTAGAGTGGAGACCACTGTCAAGGATCTAGGCCTTGAAAGATGCCGCCACACAAAAATAGGTGGAGGATATCTCAAAGGCATATCTGGAGGAGAAAGGAAGCGAACCAGCATAGGCTATGAAATCCTTGTTGATCCTTCACTGCTGCTACTTGATGAACCAACTTCAGGCCTTGATTCCACCTCAGCAAACAGACTCCTTCTCACTCTTCAGGGGCTTGCCAAGGGTGGAAGGACCATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTGATTTCAGAAGGCTATCCCATTTACTATGGGAAAGCTAAGGACTCAATGCAGTACTTTTCATCCTTGAGGTTCATCCCAGAAATACCAATGAATCCTGCAGAGTTCCTGCTTGACTTGGCAACTGGACAAGTGAATAACATAAGCGTACCACAAGATATTTTTAAAGATCAAGAATCTGCTGACTCTTCAAAAGCTGTTATTAAATATCTACAACTCAAGTATAAAGACACACTGGAACCAAAAGAAAAAGAAGAGAATCATGGAGCTGCAAACACACCAGAACATCTTCAGCTAGCCATTCAGGTTAAAAAGGACTGGACAGTGAGTTGGTGTGACCAATTCGTTATTCTTTATAAGAGAACATTCAGAGCAAGATGCAAGGACTATTTTGATAAATTAAGACTAGTTCAAGCACTTGGCATTGCACTTTTGTTGGGGCTACTTTGGTGGAAATCTTCTACCAATACAGAGGCTCAAGTTAGAGATCAGGTAGTTGGTTTAATGTTCTATATCTGTATATTCTGGACATCTTCATGTATTTTCGGAGCAGTCTATGTCTTTCCATTTGAAAAGGTCTACTTGGTGAAAGAAAGAAAAGCAGACATGTATAGACTGAGTGTATACTATGCAAGCAGCACTCTGTGTGACATGGTGGCGCATGTTTTCTACCCTACTTTTTTCATGTTAATCTTGTACTTCATGGCCGGATTTAAGAGGACCATTGCTTGCTTCTTCCTGACTTTGTTTGCGGTGTTGTTAATTGCTATAACAAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGGATGGTTGCTTCTTTGATACTAATGTTATTCCTTCTCACAGGTGGCTACTATGTTCAGCACGTACCGAAGGCGATGCAGTGGTTGAAGTATTTGTCGTTCGTGTACTATGGGTTCAGACTTCTTCTAAAAGTGCAGTATTCAGGAGAGCAACCATATGAGTGTGAAAGCGAAGGAGGGTGCAGGACACTGCAGAGTTCACCATCATTTGACACTGTAAACTTAGAAGGAGGCTTAACTGAAGCATGGGTTCTCGTAGCCATGGCTATATGCTTCCGCGTATTTGCTTACTTCTCTCTCCGCAGACGAATTGACGTTTGCAATTAG 2064 0.4215 MEKEREDEIEDMSMSPPSIGSMQIAGSNGFGHSMEFMSQAYLPNMYTEIDIKVEDSSFNQDPPLPIYLKFEDVEFKVRDSQAASNNPVMTMMSKVATQHHVEEDRYKKILKSITGSIGPGEILALMGPSGSGKTTLLRVVGGRLIDNVKGKITYNDVRFNPAVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPSNMSKQQKYARVETTVKDLGLERCRHTKIGGGYLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANRLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKAKDSMQYFSSLRFIPEIPMNPAEFLLDLATGQVNNISVPQDIFKDQESADSSKAVIKYLQLKYKDTLEPKEKEENHGAANTPEHLQLAIQVKKDWTVSWCDQFVILYKRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQVRDQVVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYASSTLCDMVAHVFYPTFFMLILYFMAGFKRTIACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHVPKAMQWLKYLSFVYYGFRLLLKVQYSGEQPYECESEGGCRTLQSSPSFDTVNLEGGLTEAWVLVAMAICFRVFAYFSLRRRIDVCN 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01772 687 SMART AAA_5 119 310 IPR003593 GO:0016887
Pumo9g01772 687 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 332 IPR003439 GO:0005524
Pumo9g01772 687 Pfam ABC-2 type transporter 417 626 IPR013525 GO:0016020|GO:0140359
Pumo9g01772 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 325 IPR027417 -
Pumo9g01772 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 674 - -
Pumo9g01772 687 CDD ABCG_EPDR 106 314 - -
Pumo9g01772 687 Gene3D - 95 327 IPR027417 -
Pumo9g01772 687 Pfam ABC-2 type transporter 289 350 IPR043926 GO:0140359
Pumo9g01772 687 FunFam ABC transporter G family member 22 97 326 - -
Pumo9g01772 687 Pfam ABC transporter 110 260 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01772 Pumo-Chr9 46851539 46854949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01772 108 293 Calmodulin-binding Proteins AT2G36910 29.843 2.79e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01772 K05681 - gmx:100815259 1290.4