Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01757 ATGATTGAGCTTCCACTACCTGCCAAATTCATTATTCACATTCAGTTCCTGGATTTGAAGACTACAAGTCCAAATGGTGGAGAACCTTGCTCTATCTGGCCTAACAGATTTTTGCAGCAAAAATCAAATGCAACAGCTCGAATGCTAACACAAAGCATCCACACAGACATCACAATCAATGCCAATGAGTCTGATGGAAGAAGCATAAGAGCTCACCGAGCTGTACTCGCTGCTCGGTCACCGGTATTCCACAGCATGTTCTCACATAACCTTGAGGAGAATGATCTTTCTACCATAAATATCTCAGACATGTCAATTCAAGCTTGCCAGGCATTTCTAAATTATCTTTATGGGACCATCAAAGATGAAGAATTTCTAACCCATAGAATGGCCCTACTGCATGCTGCTGACAAGTATGACATATATGACTTGAAAGAGGCGTGTCATGAGAGTCTGCTAGAAGATATTGATGCAAATAATGTACTTGAGAGGCTCCAAAATGCATCTCTGTATCAATTGCCGAAGCTGAAGACTAGTTGTACGCAATATCTTGTAAAGTTTGGTAAAGTATTTGACATTCGGGATGATTTCATTTCCTTCTTGCAAAGTGCAGACAGGGATCTCATTTCTGAAGTCTTTCATGAAGTTCTTAATGCGTGGAGAGGATTATGA 672 0.4048 MIELPLPAKFIIHIQFLDLKTTSPNGGEPCSIWPNRFLQQKSNATARMLTQSIHTDITINANESDGRSIRAHRAVLAARSPVFHSMFSHNLEENDLSTINISDMSIQACQAFLNYLYGTIKDEEFLTHRMALLHAADKYDIYDLKEACHESLLEDIDANNVLERLQNASLYQLPKLKTSCTQYLVKFGKVFDIRDDFISFLQSADRDLISEVFHEVLNAWRGL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01757 223 ProSiteProfiles BTB domain profile. 55 117 IPR000210 GO:0005515
Pumo9g01757 223 PANTHER OS08G0495500 PROTEIN-RELATED 2 222 IPR044714 -
Pumo9g01757 223 SUPERFAMILY POZ domain 35 154 IPR011333 -
Pumo9g01757 223 Pfam BTB/POZ domain 50 154 IPR000210 GO:0005515
Pumo9g01757 223 CDD BTB_POZ_ZBTB_KLHL-like 54 139 - -
Pumo9g01757 223 Gene3D Potassium Channel Kv1.1; Chain A 36 186 IPR011333 -
Pumo9g01757 223 SMART BTB_4 55 156 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01757 Pumo-Chr9 46734003 46734975 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pumo9g01757 BTB 2e-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01757 K10523 - gmx:100790186 342.043