Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01754 ATGGCGAGAACCCTAAATCTCACACCCATCACCGGTGCCGGCAGGACTCTCCGGCCTCCGGTCAGGGCCTCGATTCGGGCTTTCACGGCGACGGCAGCGGCGATCGATTCCCGGCGACCAGCGAGCCTCTACCAGGTGCTCCGGATCAAGCAGAACGCGTCGGCGGTGGAAATAAAATCGGCGTACCGGAACCTCGCGAAGGTGTATCACCCTGATTCGGCGCTCCGGCGGTCGGAATCGGACGAACGGGACTTCATCGAGATCCGTGACGCTTACGAGACGCTGTCGGATCCGTCAGCGAGAGCACTGTATGATCTGTCGTTAATGGCCGCGCGCGGTGGTAATCGCTCGTTCTCGTCTTTGGTGGCTGCTCCGAATGGCACTTCCGGATTCTACCATCAGACCCGCAAGTGGGAAACGGACCAATGCTGGTAG 435 0.6069 MARTLNLTPITGAGRTLRPPVRASIRAFTATAAAIDSRRPASLYQVLRIKQNASAVEIKSAYRNLAKVYHPDSALRRSESDERDFIEIRDAYETLSDPSARALYDLSLMAARGGNRSFSSLVAAPNGTSGFYHQTRKWETDQCW 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01754 144 Pfam DnaJ domain 43 105 IPR001623 -
Pumo9g01754 144 ProSiteProfiles dnaJ domain profile. 42 108 IPR001623 -
Pumo9g01754 144 Gene3D DnaJ domain 29 123 IPR036869 -
Pumo9g01754 144 SMART dnaj_3 41 100 IPR001623 -
Pumo9g01754 144 SUPERFAMILY Chaperone J-domain 42 121 IPR036869 -
Pumo9g01754 144 PRINTS DnaJ domain signature 62 77 IPR001623 -
Pumo9g01754 144 PRINTS DnaJ domain signature 80 100 IPR001623 -
Pumo9g01754 144 PRINTS DnaJ domain signature 44 62 IPR001623 -
Pumo9g01754 144 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 16 144 - -
Pumo9g01754 144 CDD DnaJ 44 97 IPR001623 -
Pumo9g01754 144 ProSitePatterns Nt-dnaJ domain signature. 85 104 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01754 Pumo-Chr9 46713390 46714184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01754 44 105 C2H2 Transcription Factor Family AT1G74250 43.939 1.15e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01754 - - gmx:100786034 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01754 9 46713390 46714184 Pumo9g01754 9 46713390 46714184 ECH
Pumo1g00720 1 11037657 11038517 Pumo9g01754 9 46713390 46714184 PCT