Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01735 ATGTCTTCTACTTCTTCTTCGTCATCATCATCATCAACTTCAACCCCATATGACGCTGTTGCTCCTGATATCCCTGGCCCTAGTACGAGGAGAACCGGTCAATTTCAACCACAAGGCCCTTCCTCCTCCTCCTCTCAACGTCAACGTGCTATGAATGAGGTCTTGCCTGAACCTTTTCTTGAAGCTCTTGCCACCCAACTTGCCCTTGATGCTGCCAACTACAATGGACGTCTTGCTGCTGCTTCTGCCCTCGCCATTTTATTTCAGGTCTGTTCCACGTGGCGAGAGGTGTCGCGGTCGGATCTGCTGTGGCAGCGGCTCACGAGACGCATCTGGCGCCGCACCTATCGAGTGAGGGCCACGTGGCACTTGGAGTACATCTATTGGCATCGGACGGCGAGGAACTTCTCGACAGGGAGTTACACGTATTTCGACCCACCGCTTGACCCATCGGACCACCAGCAGGGCCCGGGGCAGCTGTGCCGGTGCATCGCCCTCTCCGACACTCACCTGGCTTGCGGCTTCGTGGACGGCACCGTGCGTCTCTTCGACGTCGAAACCCACGCCCACGTCACCACTTTTTTGTCCCTCCACGGCCACCTCTTCGGCCCCTTCTCGCGCTCCGTCTCGGGCATCGTTCTCGTCAACTCCAATATCTCCTTCGCCAGGCTGGACGGGGATATTTACGTGGATAATGTGAACGGTCCTGGGCCCAGCCACGCGCGACGTGCCGTGGAGGGGGACGTGGTCAACAACGGGGTGTTGGTTGGGTTTGCGGGAACGGGCCGGTGGTGGGTGGGCCTGTTCGCGGGGATAGCGGGGCGGGCTTTCCAGATATGGGACGCGCGTAGTGAAGAGCGCGTGCACGTTGGGGGCACTTTGACGGATCCAGAAACGGTAATGGGATGGCACATGCTGACGGAGTTAGTTGAACCGGTGGGTCGGGTGCGCGTGACGGAGCGTGAGTTTGTTGTGGCTTGCACGGGTTCGATGCTGGTTTGTTTCAACGTTCGGAACGCGGGGGTTGTGTTGCACGAGGAGGGGTCGAACACGGGGTTCGTGGTGAGTTCCCTGGACGCGAGTTCCGAGGCGTTTGTTGTGGTGGAGAGGAACGGGTGGGGAAGGGTTCGGCGCGCGAGCACGTTGGAGCGGTTGAGCCGGTTTCGGATGAGGGGGTCGTGGGCTCAGGGGTTGTGGGCGTGCATGAACCTTGGCTATGTCTTAACCTACTCGCCTGCACCTTCGCCTTTGTTGAGGGTTTGGAACTTTGATCAGCAACCGATGGCAGAGTTGTGTGTGACGCTTGGGGTTAGATCTAGAGGGAGTGAGGTCAATGCCATGGTTGCCAATGACAGACACCTCGCTATCTCTTTCAATGACAATAACATTAACATATTGGATTTTGGTGTACATGATCCTTAG 1422 0.5759 MSSTSSSSSSSSTSTPYDAVAPDIPGPSTRRTGQFQPQGPSSSSSQRQRAMNEVLPEPFLEALATQLALDAANYNGRLAAASALAILFQVCSTWREVSRSDLLWQRLTRRIWRRTYRVRATWHLEYIYWHRTARNFSTGSYTYFDPPLDPSDHQQGPGQLCRCIALSDTHLACGFVDGTVRLFDVETHAHVTTFLSLHGHLFGPFSRSVSGIVLVNSNISFARLDGDIYVDNVNGPGPSHARRAVEGDVVNNGVLVGFAGTGRWWVGLFAGIAGRAFQIWDARSEERVHVGGTLTDPETVMGWHMLTELVEPVGRVRVTEREFVVACTGSMLVCFNVRNAGVVLHEEGSNTGFVVSSLDASSEAFVVVERNGWGRVRRASTLERLSRFRMRGSWAQGLWACMNLGYVLTYSPAPSPLLRVWNFDQQPMAELCVTLGVRSRGSEVNAMVANDRHLAISFNDNNINILDFGVHDP 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01735 473 Gene3D - 137 471 IPR015943 GO:0005515
Pumo9g01735 473 MobiDBLite consensus disorder prediction 1 18 - -
Pumo9g01735 473 PANTHER WD40 REPEAT PROTEIN 12, 37 14 461 - -
Pumo9g01735 473 MobiDBLite consensus disorder prediction 29 51 - -
Pumo9g01735 473 SUPERFAMILY WD40 repeat-like 148 467 IPR036322 GO:0005515
Pumo9g01735 473 MobiDBLite consensus disorder prediction 1 51 - -
Pumo9g01735 473 Gene3D - 42 136 - -
Pumo9g01735 473 SUPERFAMILY F-box domain 84 131 IPR036047 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Pumo9g01735 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01735 - - gmx:100807240 748.043