Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01732 ATGGAAGCGAACAAGGAGGAAGCACTTAAAGCGATAGAGATTGCTGAGAAGCGATTTGCTGTGAGAGACTTTGCAGGTGCAAAAAACTATGCTGTAAAGGCTAAAACGCTTTGTCCAGGATTGGAGGGTATATCTCAAATGGTCGCCACGTTTGAAGTTTACATTGCTTCTGAGGTCAAACATAATGGTGAGCTAGATTACTATTCGATTCTTGGATTAAAACCCTTTGCAGATAAGGAGGCTGTAAAGAAACAGTACAAGAAGTTGGCGGTGTTGCTTCACCCAGACAAGAACAAATGTGTGGGAGCAGACGAGGCATTTAAGCTTGTTTCTGAGGCTTGGACTTGGTTATCAGATAGTGCTATGCGCAGTTCTTATGATCTCAAGAGAAATGCACAGATGGGTGGGACTAACCAGACAAATTTGTCTCCTGCACATGCTACAGGGGCTGCAGGTTATAACAAATGTTCCAATTTGCCAACCCCTCGTGGTAGGCTTGACACCTTTTGGACAATCTGCACCTCTTGTAAGGTTCAGTATGAGTATCTGCGCAAGTATGTCAATAAAAGACTCTCTTGTAAGAACTGTCGTGGCACTTTTGTTGCTGTTGAAACTGGCGCTGCCCCAGCAAACGGTTCGTTTCCATATTGTCCTTGGTCATATGTCCCAGGAAATGGGTATGGAAGTCATTCATTTGATGGAGTTACATATGTTCCAACTAGTGCCCCCTACTTCAATGGGAATAGGGTCACAGGATACCATTCTGGCCATGGATATGAGTACGTTCCAAATGTTTCATTTCAGTGGGGCTCTGCTGGAGTTGTCAATCAAAATGGATCAACTACCTTACCTGCTGATTCTGTTCATCGGGCCAATGGAAATGTGAAGAGGGGAAGACCAAAAGTTAAATCAGGAGCTGATAAGAGGCATCACACGGTAGAGGCTATGGTCAATACAAATTCAGATGTACCATTCTCCTGTAGTGAACCACAGGAAGATAAACTAAGTAGACCTGACAAGAAACAGAAAGTTGTTGTGGGAGCCAGTTTCAGAAATGGCCATGAAGAAAAGGGTTCAAAATGTGCTTCAGAGTCAATAGTGGCTAACGGAAATGATAGCATGGGACATGGCCAAAAGCCTTCCTGCACAGTCGAAGTTCAAACCAAACAGTGTTCCATGGCACCGGCATTTGACGCGAGAAAATTATTGATTGAGAAAGCCAGGACAGAAATCAGGAAGAAACTGGAGGAGATGAAGTTGTCATCTGAAGCAGCAGCAGCTGCAGCTCTGAATGAGAAAGAAAAATCACAAGCTGAAGTTGGTCAAGTAAAAAGAGAGACATGTAGAAAAGCAGCTCTGAATGTTTCTGGTTTACAATTAGAGAATGGGAAAACTGGTCCAATCTCAATTACTGTCCCAGATTCTGACTTTCATGACTTTGATAAAGATAGGTCAGAGGAATGCTTCAGGCCAAAGCAAATATGGGCCTTGTATGATGAGGAAGATGGAATGCCACGGTTGTATTGTATGATCCGTGAGGTTGTGTCTGTCAATCCATTTAAGCTTCACATCAGTTACTTGAGTTCCAAAACTGATAGTGAATTTGGCTCAGTGAACTGGCTTGATTCAGGTTTTACCAAATCTTGTGGAAATTTCAGGGCTTTTAATTCAGATGTTGTTGATCAAGTTAACATATTTTCTCATGTTCTAAGTCAGGAGAAGGCCGGCCGAGGTGGTTGCGTCCGCATATATCCCAGAAGTGGAGATATTTGGGCTGTGTATCGAAATTGGTCACCGGATTGGAACAGATCTACTCCAGATGAAGTGAGGCATCAGTATGAAATGGTTGAGGTGCTGGATGAATACTCTGAGGAACTTGGTGTTTGTGTTAGTCCTCTTATTAAGTTGGCTGGATTTAAAACGGTATATCAGAGTAATACAGACAAGAGTGCCATAAAATGGATACCCAGAAGAGAGATGTTGCGCTTTTCACATCAAGTGCCTTCTTGGTTGCTGAAGGGGGAGGCTGGCAATTTGCCTGAAAGGTGTTGGGACCTTGATCCGGCTGCAACTCCAGATGAGCTTCTTCATGCTGCTACAGAACCAAACGCTTTGTAG 2118 0.4344 MEANKEEALKAIEIAEKRFAVRDFAGAKNYAVKAKTLCPGLEGISQMVATFEVYIASEVKHNGELDYYSILGLKPFADKEAVKKQYKKLAVLLHPDKNKCVGADEAFKLVSEAWTWLSDSAMRSSYDLKRNAQMGGTNQTNLSPAHATGAAGYNKCSNLPTPRGRLDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFVAVETGAAPANGSFPYCPWSYVPGNGYGSHSFDGVTYVPTSAPYFNGNRVTGYHSGHGYEYVPNVSFQWGSAGVVNQNGSTTLPADSVHRANGNVKRGRPKVKSGADKRHHTVEAMVNTNSDVPFSCSEPQEDKLSRPDKKQKVVVGASFRNGHEEKGSKCASESIVANGNDSMGHGQKPSCTVEVQTKQCSMAPAFDARKLLIEKARTEIRKKLEEMKLSSEAAAAAALNEKEKSQAEVGQVKRETCRKAALNVSGLQLENGKTGPISITVPDSDFHDFDKDRSEECFRPKQIWALYDEEDGMPRLYCMIREVVSVNPFKLHISYLSSKTDSEFGSVNWLDSGFTKSCGNFRAFNSDVVDQVNIFSHVLSQEKAGRGGCVRIYPRSGDIWAVYRNWSPDWNRSTPDEVRHQYEMVEVLDEYSEELGVCVSPLIKLAGFKTVYQSNTDKSAIKWIPRREMLRFSHQVPSWLLKGEAGNLPERCWDLDPAATPDELLHAATEPNAL 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01732 705 SMART dnaj_3 65 122 IPR001623 -
Pumo9g01732 705 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pumo9g01732 705 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pumo9g01732 705 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pumo9g01732 705 Pfam Domain of unknown function (DUF3444) 469 675 IPR024593 -
Pumo9g01732 705 MobiDBLite consensus disorder prediction 321 343 - -
Pumo9g01732 705 Gene3D DnaJ domain 55 149 IPR036869 -
Pumo9g01732 705 PANTHER BNAC03G44070D PROTEIN 1 692 - -
Pumo9g01732 705 MobiDBLite consensus disorder prediction 283 308 - -
Pumo9g01732 705 Coils Coil 426 446 - -
Pumo9g01732 705 SUPERFAMILY Chaperone J-domain 59 131 IPR036869 -
Pumo9g01732 705 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Pumo9g01732 705 Pfam DnaJ domain 66 127 IPR001623 -
Pumo9g01732 705 CDD DnaJ 66 119 IPR001623 -
Pumo9g01732 705 Coils Coil 404 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01732 Pumo-Chr9 46452626 46456079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01732 4 301 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.938 1.75e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01732 - - gmx:100792639 1368.21