Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01727 ATGCCCCAAGCAACAACCTCGTCCTCAGCTGCTGGTGGTGGTGGTGATGGTTCCGACATTGAACTTGGTGCTACCTTACTCCTCACCACCACCAGCAACAGCAAGTACACCAGGATGTGGCGTAGAAGTTTATACATAAGATTCCTCATCTCTGTCAAGAAGCCAACAACTTCCACTGGCAACCATGAGTCGCCACCATCACTACTTTCTTCAGTACCGTACACTTCAGTGCCTTCTGTTACAATTGATATAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGCGCATTAGGAGTGATATTGCTCGAATTGTGAAGGAGAAGAACTTGAAATCTTTCCATGAGCTTGGTGGGGTTGACTCCGTTTTCGCTGTCCTTGGTCGTCAACAGCAACACTCAGAGGTGGGCACTGTTGATGATGGCAACACCATTATACCATTACCAGTTCTTGGAACAAACTTGTCCATGTTTTTATTGAATAGCTGCAAATGCCACCGTTGCACAATTTTGATGCTGTTGGTCTCAGCTGGGTTGTCATTCGCCATAGAGTTCAAGAAAGAGGGACCTAAACATGGTTGGCATGATGGTGTTGCTATACTTTTTGCTCTTCTCCTGATGGTTCTAGGAAAATCAGTAGCAAACTTTTTGCGTGAGAGAGAAATGTTGAAATTGGCAAAGAGAAAGCATGAGTTGGAATTCAGAGTTAAAAGAGGTGAAGAATCCCTAATGGTTACCAATTTGGCTGGGATAGGTACAAGTAATGCTGAAAGGAGGGCCTTGTTGGAGAGTCTAATTGAGAAGCCAATTTCTTACATTGACATAGCTGCTCTTTTTATCTCTGTACTGGTTGCACTTGTGGTGTTAATTCGCCTAATTTGTGGAAAAGATGGGAGCAATGGTGGGTTGCCAGAAATGAAAGGGAAGGTCTCAATTAGCTTCTTGATGGAAGCCCTTAAGAGAGTTTTTTTGAGACCACAAGGAAGCGTTTCCACTTTATCAGGTCTTGTAACTGTTGCAATACTATGCGTGCAGCATGGAATGCCACTTGTGGTTACAGTTTCTCTCAAGTACCAGATTGATAAGGTAGTGTCAAACAAGGATGCAGTTGTTAATGATTTATCAGCTTGTACGACAATGGGGTTGGTAACTGTCATCTTTATTGATGCATCAGGTGGGCTCATATCTAAACCATCCGAGGTTAGCAGAATATGGATGGGGGAGAAAGATATCAGCAATGTTGAGGAATCAGAAACAGACAAACCTGTGCTTGACATGCTTCAACAAGGGGTTGGTTTATCAGTCCTTGCACCAGAGATTTCTCTTTCTCCTTTGTCCAATTCACTTGCTTCTTGGGCAGAAACAACATGGGAAATGAACATAAGATCTTTCACAGAAAATTTTGACATTCTTAAGCACAGAAAACTGAATTCTGGCAAAGAAGGAAGTGGAGTTTTGGTGAGAAAAATTGGGGACAATGAAGTTCTGCACTTGCACTGGAGTGGAGCTGCATCCACAATATTGGATATGTGTTCACATTACTATGATAGTAAAGGGAATAGCCATGCCATGGAAAATCAGAAAATCATATTTGGGCAGGTGATTAAAAAGATGGAGGATGATGGCCTTAAGCCAATTGCTTTTGCTTATAGACAAACAGATGGAGAAGAACTTGAGCAAGAAGAACTGATCTTGTTAGGACTGTTAGGTCTCAAATACACTAGTAAAGAAACCATAAAATCAGCTTTGGAAAATCTCAGAAATGCTGCAAATGTACAGATCAAACTGGTCTCGGAGGATGACATCAGGGTAGTGCAAGGCTTAGCTTGGGAACTAGGACTAGAGCATGGTATTGTGCTTGAAGGAAAAAAACTTCAAGATTTGAATGAGGAAGCTAGATTAGACGAAGTGGACCGAGCCCATGTAATGGCAAGCTTCCATCCTGAGGACAAACTTCTCATGATACAGTGCTTGCAAGAGAAAGGTAAGGTGGTTGCATTCATTGGAACAAGGTTGATGACTAATCATAGTTCAGTTCTAAAGGTAGCTGATGTGGGGATAGTTCATGATTCTCTGAGCACAATAGTGGATAGAGATAGTTGTGACATATCTATTAAATGTTTCAGTGCATTGAAACCAATTGTGATGGCTGGCAGAAGTAAATACCACAATATTCAGAAGTTCATTCAACTTCAGCTGACATGTACCATATCAGGGTCAGTCATAACCTTAATTACAACATGTACTGGAGATTCCCCCCTTGCAGCATCCCAGTTGATTTGGGTGAATGTTTTGATGTGCATTCTGGGAGGCCTAATGATGGTAATGAAGTTAACCAGCGAGGAACAACTTGCCATGCAACAATCTGATCATAGGAACCAACGTATTATAACCAAAGAAATCTGGAAAAGCATTGTTATTCAGGTATTATATCAGGCTTCTGTGTCAATGATACTTGAGTTCGGTGGACATGTTACTGACAGGGAGAAAAAAGTTAGGGAAAGCCATGATCTTCAACACATTCCTATTGTGCCAAGTCTTCAATCTGCTCAACACCATGCAGCTGTTGAAAAAGGAAGTTCTGAAGGTGGTTGTTCAGAGCTTCTATTTCTTGGGGGCTTTAGGAGGTTGCTTTCTTTTGCAAGTTCTGGTGATTGA 2661 0.4168 MPQATTSSSAAGGGGDGSDIELGATLLLTTTSNSKYTRMWRRSLYIRFLISVKKPTTSTGNHESPPSLLSSVPYTSVPSVTIDIEEEEEEEEEEEEERIRSDIARIVKEKNLKSFHELGGVDSVFAVLGRQQQHSEVGTVDDGNTIIPLPVLGTNLSMFLLNSCKCHRCTILMLLVSAGLSFAIEFKKEGPKHGWHDGVAILFALLLMVLGKSVANFLREREMLKLAKRKHELEFRVKRGEESLMVTNLAGIGTSNAERRALLESLIEKPISYIDIAALFISVLVALVVLIRLICGKDGSNGGLPEMKGKVSISFLMEALKRVFLRPQGSVSTLSGLVTVAILCVQHGMPLVVTVSLKYQIDKVVSNKDAVVNDLSACTTMGLVTVIFIDASGGLISKPSEVSRIWMGEKDISNVEESETDKPVLDMLQQGVGLSVLAPEISLSPLSNSLASWAETTWEMNIRSFTENFDILKHRKLNSGKEGSGVLVRKIGDNEVLHLHWSGAASTILDMCSHYYDSKGNSHAMENQKIIFGQVIKKMEDDGLKPIAFAYRQTDGEELEQEELILLGLLGLKYTSKETIKSALENLRNAANVQIKLVSEDDIRVVQGLAWELGLEHGIVLEGKKLQDLNEEARLDEVDRAHVMASFHPEDKLLMIQCLQEKGKVVAFIGTRLMTNHSSVLKVADVGIVHDSLSTIVDRDSCDISIKCFSALKPIVMAGRSKYHNIQKFIQLQLTCTISGSVITLITTCTGDSPLAASQLIWVNVLMCILGGLMMVMKLTSEEQLAMQQSDHRNQRIITKEIWKSIVIQVLYQASVSMILEFGGHVTDREKKVRESHDLQHIPIVPSLQSAQHHAAVEKGSSEGGCSELLFLGGFRRLLSFASSGD 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01727 886 Gene3D - 167 398 - -
Pumo9g01727 886 Pfam Cation transporting ATPase, C-terminus 753 826 IPR006068 -
Pumo9g01727 886 SUPERFAMILY Calcium ATPase, transmembrane domain M 166 830 IPR023298 -
Pumo9g01727 886 SUPERFAMILY HAD-like 529 771 IPR036412 -
Pumo9g01727 886 Gene3D - 551 701 IPR023214 -
Pumo9g01727 886 Coils Coil 77 109 - -
Pumo9g01727 886 Gene3D - 702 863 - -
Pumo9g01727 886 PANTHER CATION TRANSPORTING ATPASE 100 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01727 Pumo-Chr9 46318639 46322267 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01727 347 824 Primary Pumps ATPases AT3G63380 36.400 2.80e-88 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01727 K01537 - gmx:102661547 839.336