Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01725 ATGTCCCAAGCAGCAACCTCGTCCTCAGCTGGTGGTGGTGGTGATGGTGATGGTGCCAACGTTGAACTTGGTGCTACCTTACTCCTCACCACCAGCGACGCCAACAGCAGCAACACCAGCAGCAACAAGATCAACTACCCCAGGATATGGCGTAGAAGTTTATACATAAGATTCTTCATCTCTGTGAAGAAGACAACAATCACCAGTGGCAACCACGAGTCTCCTTCATCTCCACTTCTTTCTTCAGTACCGTACACTTCATTGCCTCCTGCTAGAAGCTCCTCTTCCAAATCATCTGTTGCAATAGAGATAGAAGAAGAAGAACAGCGTATTAGGAGTGATATTGCTCGAATCGTGAAGGAGAAGGACTTGAAATCTCTTCATGACCTTGGTGGGGTTGACTTCGTTTCCAAAGTCCTACGTGGTCAACGTAAATACTCAAAGGAGGGCACTATTGATGATGGCAGCACCACTATACCATTTGTTCTTGGAACAAACTTGTCCAAGTCCTTATTGTACAGTTGCAAATGCTACCGTTTCATAATTTTGATGCTGTTTGTCTCAGCTGGGTTGTCATTTGCCATAGAGTTCAAGAAGGAGGGACCTAAACATGGTTGGCATGATTGTGTTGCTATACTTTTTGCTCTTCTCCTGCTGGTTCTAGGAAAATCAGTAGCAAACTTTTTGCGCGAGAGAAAAATGTTGAAATTGGCTAAGAGAAAGGACGAGTTGGAATTAAAAGTTAAAAGAGGTGAAGAGTCCCTAATGGTGCCCATATCTGATATTGTGGTTGGTGACACAGTGTGCCTGTGGCTAGGCGATGAGGTTCCAGCAGATGGTTTGCTTGTAAGTGATGGCATCCTTGTGCTCGCTGAGCCTGAGGCAATAAAAAGCAAACATGATCCTAAGGGGAACCCGTTTCTCATATCTGGTTCAAAGGTGATTGGGGGCCAGGGAAGGATGGTGGTAGCATCAGTTGGAAACAAAACCAATTTGGCTGGGATAGGTACAAGTAATGCTGAAAGGAGCGGCTTGTTGGAGAGTCTAATTGAGAAGCCAATTTCTTACATTGACAAAGCTGCTCTTTTTATCTCTGTAATGGTTCTACTCGTGGTGTTCATTCGCCTAATTTGTGGAAAAGATGGGAACAATGGTGGGTTGCCAGAAATGAAAGGGAAGGTCTCAATTAGCTTGCTGATGGAAGTCCTTAAGAGAGTTTTTTTGAGACCACAAGGAAGGGTTTCCATTTTAACAGGTCTTGTTACTGTTGCAATACTATGCGTGCAACATGGAATGCCACTTGTGGTTACAATTTCTCTCAAGTACCAGATTGATAAGGTAGTGTCAAACCAAGATGCAGTTCTTAATGATTTATCAGCTTGTACGACAATGGGGTTGATATCTGTCATCTGTATTGACATATCAGGTATGCTCATATCTAAACCACTGGAGGTTAGCAGAGTATGGATGGGGGAGAAAGATATCAGCATGGTTGAGGGATCAGAAATAGATAAAAATGTGCTTGACTTGCGTAAACAAGGAGTTGGTTTATCAGTCCTTGCGCCAGAGATTTCTCTTTCCTCTTTGTCCAATTCACTTGTTTCTTGGGCAGAAACAACATGGGCAATGAACATGAGATCTTTCACAGAAGAGAAATTTGACATTCTTAAGCACAGCAAACTGAATTCTGGCAAAGAAGGCAGCGGAGTTTTGGTGAGAGACAATGAACAAGTTCTGTACTTGCACTGGAGTGGAGCTGCATCCACAATATTGGATATGTGTTCACAGTACTGTGATAGTATAGGGGAATGCCATGCCATGGAAAATCAGAAGCTCAAATTTGGGCAGGTGATTAAAGAGATGGAGGATGGTGGCCTTAAGCCAATTGCTTTTGCTTATAGACGAACAGATAGAGAAGAACTTGAGCAAGAAAAACTGATCTTGTTAGGACTGATAGGTCTCAAATACACTAGTCAAGAATCCATAAAATCAGCTTTGGAAAATCTCAGAAATGATGCAAATATACAGATCAAACTGGTCTCGGAGGATGACATCATGGAAGTGAAAGGCATAGCTTGTGAACTAGGACTAGAACATGGTAATGTGCTTGAAGGAAAAGAGCTTCGGGATTTGAAAGGGGAAGCTAGATTAGACAAAGTGGATCAAGCCCATGTAATGGGAAGCTTCCATCCTAAAGACAAACTTCTCATGATACAGTGCTTGCAAAAGAAAGGTAAGGCGGTTGCATTCATTGGAACAAGGTTGATGACTAGTCATACTTCAGTTCTAAAGGTAGCTGATGTGGGGATAGTTCATGATTCTCGTAGCACAATAGTGGATAGTGATAGTTGTGACATATCTATCAAATGTTTCAGTGCATTGGAACCTATTGTGATGGCTGGCAGAAGTCAATACCACAATATTCAGAAGTTCATTCAACTTCAGCTGACATGTACCATATCAGGGTCAGTCATAAGCTTGATTACAACATGTACTGGAGATTCCCCCCTTGCGGCAACCCAGTTGATTTGGGTGAATGTTTTGATGTGCATTCTGGGAGGCCTAATGATGGTAATGAAGTTAGCCAGCGAGGAACAGCTTGCCAAGCAACAATCTGATCATAGGAACCAACATATTATAACGAAAGAAATCTGGAAAAGCATTGTTATTCAGGTATTATATCAGGCTTCTGTGTCAATGATACTTGAGTTCGGTGGACATGTTACTGACAGGGAGAAAAAAGTTAGGGAAACCATGATCTTCAACACATTCCTATTGTGCCAAGTCTTCAATCTGCTCAACACCATGCAGCTGTTGAAAAAGGAAGTTCTGAAGGTGGTTGTCCAGAGCTTCTATTTCTTGGGGGCTTTAGGAGGTTGCTTTCTTTTGCAAGTTCTGGTGATTGAGTATGCTAATGGCCTAGCAGATTGCATGCAGCTGAATGCTTCGAGATGGTTTATCTGTGTCTTGATTGGTGCTCTTCCATACGTATTTGAATGGACCTTGAAGAATATTCTTCCAGTTATTCTCAACCCCAGCACCAATTATGCTTCAGAATCAATTACTTCACCTTATTCATTCTATCTTTCTCTACGTTTTTCATTTCTGATGCTCCTTTTGTTCCCTGTAGGACTAATTTTTAGTCAAATAGGCATGAACATGACAATTCGTTAG 3174 0.4209 MSQAATSSSAGGGGDGDGANVELGATLLLTTSDANSSNTSSNKINYPRIWRRSLYIRFFISVKKTTITSGNHESPSSPLLSSVPYTSLPPARSSSSKSSVAIEIEEEEQRIRSDIARIVKEKDLKSLHDLGGVDFVSKVLRGQRKYSKEGTIDDGSTTIPFVLGTNLSKSLLYSCKCYRFIILMLFVSAGLSFAIEFKKEGPKHGWHDCVAILFALLLLVLGKSVANFLRERKMLKLAKRKDELELKVKRGEESLMVPISDIVVGDTVCLWLGDEVPADGLLVSDGILVLAEPEAIKSKHDPKGNPFLISGSKVIGGQGRMVVASVGNKTNLAGIGTSNAERSGLLESLIEKPISYIDKAALFISVMVLLVVFIRLICGKDGNNGGLPEMKGKVSISLLMEVLKRVFLRPQGRVSILTGLVTVAILCVQHGMPLVVTISLKYQIDKVVSNQDAVLNDLSACTTMGLISVICIDISGMLISKPLEVSRVWMGEKDISMVEGSEIDKNVLDLRKQGVGLSVLAPEISLSSLSNSLVSWAETTWAMNMRSFTEEKFDILKHSKLNSGKEGSGVLVRDNEQVLYLHWSGAASTILDMCSQYCDSIGECHAMENQKLKFGQVIKEMEDGGLKPIAFAYRRTDREELEQEKLILLGLIGLKYTSQESIKSALENLRNDANIQIKLVSEDDIMEVKGIACELGLEHGNVLEGKELRDLKGEARLDKVDQAHVMGSFHPKDKLLMIQCLQKKGKAVAFIGTRLMTSHTSVLKVADVGIVHDSRSTIVDSDSCDISIKCFSALEPIVMAGRSQYHNIQKFIQLQLTCTISGSVISLITTCTGDSPLAATQLIWVNVLMCILGGLMMVMKLASEEQLAKQQSDHRNQHIITKEIWKSIVIQVLYQASVSMILEFGGHVTDREKKVRETMIFNTFLLCQVFNLLNTMQLLKKEVLKVVVQSFYFLGALGGCFLLQVLVIEYANGLADCMQLNASRWFICVLIGALPYVFEWTLKNILPVILNPSTNYASESITSPYSFYLSLRFSFLMLLLFPVGLIFSQIGMNMTIR 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01725 1057 Gene3D - 231 340 - -
Pumo9g01725 1057 Pfam E1-E2 ATPase 246 440 - -
Pumo9g01725 1057 Gene3D - 481 501 IPR023299 GO:0000166
Pumo9g01725 1057 FunFam - 791 1013 - -
Pumo9g01725 1057 Coils Coil 234 254 - -
Pumo9g01725 1057 PANTHER CATION TRANSPORTING ATPASE 111 1005 - -
Pumo9g01725 1057 SUPERFAMILY Calcium ATPase, transduction domain A 246 335 IPR008250 -
Pumo9g01725 1057 Gene3D - 650 790 IPR023214 -
Pumo9g01725 1057 Gene3D - 791 1007 - -
Pumo9g01725 1057 Gene3D - 468 480 IPR023214 -
Pumo9g01725 1057 SUPERFAMILY HAD-like 470 853 IPR036412 -
Pumo9g01725 1057 Pfam Cation transporting ATPase, C-terminus 835 1003 IPR006068 -
Pumo9g01725 1057 SUPERFAMILY Calcium ATPase, transmembrane domain M 178 1006 IPR023298 -
Pumo9g01725 1057 Gene3D - 176 467 - -
Pumo9g01725 1057 Gene3D - 530 649 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01725 Pumo-Chr9 46305882 46310140 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01725 82 1032 Primary Pumps ATPases AT3G63380 32.427 3.14e-137 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01725 K01537 - gmx:102661547 1454.88