Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01724 ATGACTTCGTCCGCAAGACCGGTGGCGCCGGCAAAGGCCGCACTAACATGCGCCGTACCGTCAAGAGTGCTCCTCAGAGCATTTGGTATGGCCCATGACCGTCCCAAGTACTTGGGTCCATTCTCTGACCAGATTCCATCATACCTGACTGGAGAATTCCCCGGTGACTACGGATGGGACACAGCTGGATTATCAGCTGACCCAGAAACCTTCGCCAGGAACCGCGAGCTCGAGGTGATTCACAGCAGATGGGCCATGCTCGGTGCCCTTGGATGCACCTTCCCAGAGATCCTTGAGAAGAATGGTGTCAAATTCGGCGAGGCAGTGTGGTTCAAGGCTGGTGCACAGATCTTCTCTGAGGGAGGCCTTGACTATTTGGGCAACCCAAACCTGATCCATGCTCAGAGCATTCTTGCAATCTGGGCTGTTCAGGTTGTGCTGATGGGATTTGTTGAAGGTTACAGAGTTGGTGGAGGACCACTTGGTGAAGGACTAGACCCAATCTACCCTGGAGGTGCCTTTGACCCTCTTGGTCTTGCTGATGACCCTGATGCATTTGCTGAGTTGAAGGTCAAGGAACTCAAGAACGGTCGCTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTTCAGGCCATTGTCACTGGCAAGGGCCCTATTCAGAACCTTTACGACCATCTTGCTGATCCTGTTGCCAACAATGCTTGGGCTTATGCCACTAACTTTGTCCCTGGACAATGA 738 0.5244 MTSSARPVAPAKAALTCAVPSRVLLRAFGMAHDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHLADPVANNAWAYATNFVPGQ 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01724 245 Pfam Chlorophyll A-B binding protein 46 211 IPR022796 -
Pumo9g01724 245 FunFam Chlorophyll a-b binding protein, chloroplastic 36 238 - -
Pumo9g01724 245 SUPERFAMILY Chlorophyll a-b binding protein 32 242 - -
Pumo9g01724 245 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 30 244 IPR001344 GO:0009765|GO:0016020
Pumo9g01724 245 Gene3D Chlorophyll a/b binding protein domain 36 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01724 Pumo-Chr9 46302161 46303526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01724 33 245 Chloroplast and Mitochondria Gene Families AT2G05070 91.549 8.83e-150 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01724 K08913 - gmx:100815789 443.351