Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01712 ATGCAGGCATCAGAGCAACATAGAAGTTCAAGTATGTACTATCAACCATTACAGCAAATTGAAGCCTACTGCTTGCCGCAGTATCGGACTCTAAATCAACAGCTATACTACCATGATGGAGGCCATGGAACTCACTTTTCAACTCCAAGTTCTTCTGAACTTTACTGCACTTTGGAGTCATCTTCTGTAGCTGGCAGTTTCACTCTTTACAACTCCCCTTCAACTGTTAGTTTCTCACCTAATGGTAGCCCCATATCGCAGCAAGACTCTCAGTCATATCCACCTGAGCAGTATCATTCCCCTGAGAATACCTATGGCTCTCCTATGAGTGGCTCCTGCATAACTGATGATTTAAGCAGCTTCAACTTCAAGCACAAGCTGAGAGAGTTGGAAAGTGTAATGCTTGGCCCTGACTCTGATAATCTTGATAGTTATGACAGTGCCATCAGCAATGGAAACAACTTTATTCCACTTGAGATGGACAGTTGGAGACAAACAATGGTGGCAATTTCTACCAAAAACCTAAAGCACATTCTTATTGCATGTGCCAAAGCCATTTCAGACAATGATTTGCTAATGGCACAATGGCTGATGGATGAATTAAGGCAGATGGTGTCAGTTTCTGGCGATCCAATTCAACGGTTGGGAGCATACATGTTGGAAGGACTTGTTGCCCGATTGGCTGCCTCTGGGAGTTCAATATACAAATCTTTAAGATGCAAAGAACCGGAAAGTGCTGAGCTTCTCTCCTACATGCACATACTGTATGAGGTTTGCCCCTACTTCAAATTTGGGTACATGTCTGCAAATGGAGCCATTGCAGAAGCCATGAAAGATGAAGACAGAGTTCACATAATTGATTTCCAAATTGGTCAAGGAAGCCAGTGGATCACTTTAATTCAGGCTTTTGCAGCTAGACCTGGAGGGCCACCCCACATCCGGATTACAGGTATTGATGATTCAACATCAGCTTATGCCCGTGGTGGTGGACTACACATAGTGGGAAGGAGGTTATCAAAGCTTGCTGAGCATTTCAAGGTGCCATTTGAATTTCATGCTGCAGCTATCTCTGGTTGTGATGTTCAACTACATAACCTTGCAGTTCGACCGGGGGAAGCTCTGGCTGTAAATTTTGCATTCATGCTACATCACATGCCGGATGAAAGTGTGAGTACTCAGAATCACAGGGATAGGCTGTTGAGGTTGGTTAGGAGCCTATCACCAAAGGTGGTGACACTTGTTGAGCAAGAATCTAACACAAACACTGCTGCATTCTTTCCACGTTTCCTTGAAACTCTGGACTATTACACAGCAATGTTTGAGTCAATAGATGTGACTCTTCCCAGAGAGCATAAAGAGAGAATCAATGTTGAGCAGCATTGTTTGGCAAGAGACTTGGTTAACATCATAGCTTGTGAAGGAGTTGAGAGGGTGGAACGACATGAGGTGCTTGGGAAGTGGAGGTCAAGGTTTGCAATGGCCGGTTTCACTCCTTACCCTTTGAGTTCATTGGTGAATGGTACCATAAAAAAATTGCTTGAAAACTACAGTGATAGATATAGACTTGAAGAGAGAAATGGAGCTCTTTATCTGGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCTTGGAAATGA 1638 0.4359 MQASEQHRSSSMYYQPLQQIEAYCLPQYRTLNQQLYYHDGGHGTHFSTPSSSELYCTLESSSVAGSFTLYNSPSTVSFSPNGSPISQQDSQSYPPEQYHSPENTYGSPMSGSCITDDLSSFNFKHKLRELESVMLGPDSDNLDSYDSAISNGNNFIPLEMDSWRQTMVAISTKNLKHILIACAKAISDNDLLMAQWLMDELRQMVSVSGDPIQRLGAYMLEGLVARLAASGSSIYKSLRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGRRLSKLAEHFKVPFEFHAAAISGCDVQLHNLAVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVRSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYRLEERNGALYLGWMNRDLVASCAWK 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01712 545 Pfam GRAS domain family 175 545 IPR005202 -
Pumo9g01712 545 MobiDBLite consensus disorder prediction 78 106 - -
Pumo9g01712 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
Pumo9g01712 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 139 539 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01712 Pumo-Chr9 46220414 46222051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01712 12 545 GRAS Transcription Factor Family AT5G48150 65.741 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo9g01712 GRAS 2.5e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01712 - - gmx:100808300 1066.22