Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01711 ATGGTTTCTTCAGACAAAAGTGCGGATCAAAATATCCCTTCTGATAAATTGCAGCAGAGAGTGAGTCCTGACAGTGATACTACATTGTCACAAGGTCATGATACTAAAAATGATCTGTCCAAACCAGAGGAAGCAACAAGTACTCCTTCTATTGTAGCTAAAAATGAGGAAGGGAAGGATTCTGATGCTACTGCTTGTGCCTTGGAATCAGATCAAGAAGGAAGCACATGCTCTTTACCACTTGGGAAACCTTTGCTGAGCCCTGATACTCTTTCGTATGAATTGCCTCAATTGCAGTCCAGTCAGGAAAGTCCCTCTATAATACGTGAAAAGGTATCAAAAGATGGCTATAACTGGCGAAAATATGGTCAGAAACATGTTAAGGGGAATGAATTTATAAGGAGCTATTACAAGTGTACGCATCCAAACTGCCAGGCAAAAAAGCAATTGCAGCAGTCAAATAATGGGCATATCACAGATTCCATTTGTATCGGTCAGCATAATCATCCTAGACCTCAATTGAACTCCACAGTATCAGTTGAGTGTGTTCTGCCTGTTGTTGAACAAGCACCACACAAACCCTCTTTAGCCAATGTGGAAGACACAACATCCGTTGAGCATGGATGTATGCCTCAACAGATCAAGCCTTTACGTTCCTTTCCGACTGCAAAAGTTTCCCCAGTTAATGAGTTGAAAGCTGCACATTTACAATTGACTAAGGCAAAGAATCAGGTTCATGACAACGAGGAACCTGAGTCAAAGCGGCTGAAGAAAGACAATAGTAATGCTGATGTCACTAGAGTTGACATGTCAACTCGTGAATCTCGTGTTGTTGTTCAGACTTCAAGTGAGGTTGATCTGGTAAATGATGGGTATCGCTGGCGCAAATATGGGCAGAAGCTAGTTAAAGGGAATACAAACCCAAGAAGTTATTATCGATGCTCTAATCCTGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATTCAAAAATTGTAATAACTACCTATGAGGGACAGCATGATCATGAAATCCCCCCTGGAAGGACTGTCACTCATAATGCAGCTGCAAATACTCACACAACGGCCACTAATGGTGAGGCAGGAACCAAATCTGAGGGTAATACTGATGATACAGGGGAACGAAGTGGCTTGGGCCCGGCAAGCAGATTAACAGAGCAACTAAATGGCAAGTCAATTACTAAGTCAAAGGGTGGTGATATGGTTGAGATTCGTGTGATCAGCCTTTCTAATGAGGGTCCTGAAATTAAATTAAGTGAGCAACAACAACAAGAAAATAACTCAGCTACTAAAAACGATTCTGTCAGCAATGACGTCATATGCCATTCAAGTTCTGGAGTTCTGTGTAGATCAGATGAAGACCTGAAAGGTGAGGTAAAACCTATATCAGAAGGAAGTAAGGATTGCCTTAATGTGGTTGCCGTTCATGATACTCCTAGTACAGAAAGTGAATTTAATAAGCAATCAGCAGCTGATGCAGAACCGGTCCAAAGCTAA 1524 0.4199 MVSSDKSADQNIPSDKLQQRVSPDSDTTLSQGHDTKNDLSKPEEATSTPSIVAKNEEGKDSDATACALESDQEGSTCSLPLGKPLLSPDTLSYELPQLQSSQESPSIIREKVSKDGYNWRKYGQKHVKGNEFIRSYYKCTHPNCQAKKQLQQSNNGHITDSICIGQHNHPRPQLNSTVSVECVLPVVEQAPHKPSLANVEDTTSVEHGCMPQQIKPLRSFPTAKVSPVNELKAAHLQLTKAKNQVHDNEEPESKRLKKDNSNADVTRVDMSTRESRVVVQTSSEVDLVNDGYRWRKYGQKLVKGNTNPRSYYRCSNPGCPVKKHVERASHDSKIVITTYEGQHDHEIPPGRTVTHNAAANTHTTATNGEAGTKSEGNTDDTGERSGLGPASRLTEQLNGKSITKSKGGDMVEIRVISLSNEGPEIKLSEQQQQENNSATKNDSVSNDVICHSSSGVLCRSDEDLKGEVKPISEGSKDCLNVVAVHDTPSTESEFNKQSAADAEPVQS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01711 507 MobiDBLite consensus disorder prediction 241 264 - -
Pumo9g01711 507 MobiDBLite consensus disorder prediction 424 446 - -
Pumo9g01711 507 SUPERFAMILY WRKY DNA-binding domain 280 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g01711 507 Gene3D WRKY domain 101 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g01711 507 ProSiteProfiles WRKY domain profile. 283 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01711 507 Pfam WRKY DNA -binding domain 114 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01711 507 Pfam WRKY DNA -binding domain 289 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01711 507 FunFam WRKY transcription factor 100 173 - -
Pumo9g01711 507 MobiDBLite consensus disorder prediction 242 264 - -
Pumo9g01711 507 MobiDBLite consensus disorder prediction 1 83 - -
Pumo9g01711 507 SMART WRKY_cls 113 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01711 507 SMART WRKY_cls 288 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01711 507 FunFam WRKY transcription factor 57 274 348 - -
Pumo9g01711 507 MobiDBLite consensus disorder prediction 362 391 - -
Pumo9g01711 507 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 48 368 IPR044810 GO:0003700
Pumo9g01711 507 Gene3D WRKY domain 275 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g01711 507 MobiDBLite consensus disorder prediction 487 507 - -
Pumo9g01711 507 SUPERFAMILY WRKY DNA-binding domain 109 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g01711 507 ProSiteProfiles WRKY domain profile. 108 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01711 507 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01711 Pumo-Chr9 46215153 46219076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01711 98 370 WRKY Transcription Factor Family AT2G04880 48.029 9.25e-84 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo9g01711 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01711 K18834 - gmx:100781219 931.784